6 days ago by
Researcher
▴
30
0
votes
4
replies
304
views
0
votes
2
replies
296
views
updated 4 days ago by
Zhenyu Zhang
★
1.2k
•
written 14 days ago by
yahn
•
0
0
votes
2
replies
294
views
6 days ago by
carolofharvest
▴
40
2
votes
4
replies
294
views
2 days ago by
Esraa
•
0
1
vote
4
replies
284
views
1
vote
4
replies
282
views
3
votes
2
replies
281
views
3 days ago by
analyst
▴
50
0
votes
5
replies
281
views
2
votes
3
replies
280
views
1
vote
3
replies
278
views
updated 2 days ago by
jared.andrews07
★
16k
•
written 3 days ago by
jen
▴
10
2
votes
3
replies
276
views
3 days ago by
ramiro.barrantes
•
0
1
vote
3
replies
270
views
2
votes
4
replies
269
views
updated 2 days ago by
yura.grabovska
▴
90
•
written 2 days ago by
ev97
▴
20
1
vote
2
replies
268
views
3 days ago by
Lukas
•
0
3
votes
3
replies
268
views
2
votes
5
replies
268
views
updated 3 days ago by
Philipp Bayer
8.5k
•
written 3 days ago by
林明德
•
0
3
votes
4
replies
268
views
6
votes
4
replies
266
views
2
votes
1
reply
263
views
updated 5 days ago by
pjb39
▴
210
•
written 7 days ago by
beantkapoor16
▴
10
0
votes
4
replies
263
views
1
vote
9
replies
260
views
1
vote
5
replies
259
views
1 day ago by
kl
▴
10
0
votes
3
replies
259
views
0
votes
4
replies
258
views
0
votes
4
replies
256
views
13 hours ago by
kilcdincer
▴
10
1
vote
5
replies
253
views
0
votes
1
reply
246
views
0
votes
4
replies
244
views
1
vote
5
replies
242
views
updated 23 hours ago by
Ram
43k
•
written 1 day ago by
manuelmourato25
•
0
0
votes
1
reply
242
views
updated 4 days ago by
Zhenyu Zhang
★
1.2k
•
written 7 days ago by
jain72744
▴
10
0
votes
4
replies
239
views
1 day ago by
LucisTheFather
•
0
2
votes
1
reply
234
views
updated 6 days ago by
Pierre Lindenbaum
161k
•
written 6 days ago by
melissachua90
▴
70
0
votes
1
reply
233
views
updated 5 days ago by
Mathew
▴
140
•
written 7 days ago by
Lambodarswain316
•
0
0
votes
2
replies
231
views
0
votes
2
replies
230
views
updated 4 days ago by
Zhenyu Zhang
★
1.2k
•
written 9 days ago by
elisheva
▴
120
0
votes
3
replies
230
views
updated 14 hours ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
saifulislam99121
•
0
1
vote
1
reply
229
views
2 days ago by
ramiro.barrantes
•
0
1
vote
4
replies
228
views
1
vote
2
replies
225
views
2
votes
4
replies
224
views
3
votes
3
replies
224
views
1
vote
1
reply
221
views
0
votes
2
replies
221
views
2
votes
3
replies
218
views
3
votes
1
reply
216
views
1
vote
5
replies
215
views
updated 2 days ago by
Pierre Lindenbaum
161k
•
written 2 days ago by
biology_inform
▴
50
1
vote
2
replies
214
views
2
votes
3
replies
213
views
0
votes
3
replies
211
views
0
votes
2
replies
210
views
updated 4 days ago by
colindaven
6.4k
•
written 5 days ago by
ramendra.sarma
•
0
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
United States, 2 minutes ago
United States, 5 minutes ago
United States, 7 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 7 minutes ago
USA, 8 minutes ago
United States, 8 minutes ago
Recent Awards •
All
Popular Question to
finswimmer
16k
Popular Question to
Ezequiel
•
0
Popular Question to
alanh
▴
170
Popular Question to
ashkan
▴
160
Recent Replies
Answer: Design for complex RNA-Seq experiment using Deseq2
by
swbarnes2
14k
This is a rather small experiment, I don't know that you can establish a meaningful baseline for each patient with a single pre sample, and…
Comment: GG Sankey plot
by
LauferVA
4.2k
@bk11 i changed this comment to an answer. if you disagree please let me know. thanks for sharing your knowledge. VAL
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
Thanks for the input. Unfortunately, that didn't help either. I appreciate any other tips.
Thank you
Answer: GG Sankey plot
by
bk11
★
2.5k
You need to change your data table into a 'long' format. You can do something like this-
GOs_childs_recursive <- GOs_childs_recursive …
Answer: Trimming tool
by
ntsopoul
▴
60
I use Trim Galore which automatically recognizes adaptors.
https://github.com/FelixKrueger/TrimGalore
Here is the script I am using for…
Answer: Trimming tool
by
GenoMax
142k
There are plenty. `bbduk.sh` from BBMap suite (https://jgi.doe.gov/data-and-tools/software-tools/bbtools/bb-tools-user-guide/bbduk-guide/ )…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
bk11
★
2.5k
Please check out [in this link.][1]
[1]: https://github.com/jokergoo/ComplexHeatmap/issues/349
Comment: Reconstruction of locus, order contigs
by
dthorbur
★
2.0k
[Here](https://www.biostars.org/p/9544689/) is a forum post that may answer your question.
Comment: zero TPM for many gene including housekeeping when using kallisto
by
ashkan
▴
160
@atpoint I checked all transcripts of GAPDH. they all have 0 TPM.
Comment: how to treat the replicates while performing WGCNA
by
andres.firrincieli
3.6k
> 1) I do not want to merge the MEs rather I asked about replicates, as
> some replicates of same sample are showing different behavior for…
Comment: How to systematically check if a bam file is truncated
by
alanh
▴
170
For more details about what `samtools quickcheck` actually checks for, add a few `-v`'s to the command line.
$ samtools quickcheck -…
Comment: How to handle duplicated genes in TCGA data?
by
Zhenyu Zhang
★
1.2k
Second what is said above, ensembl_id is the unique identifier.
As a good bioinformatics habit, always use unique identifier for your anal…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
It doesn't work. The annotation labels are still in a default fontsize. I cant find a way to set the fontsize.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
43k
Yes. The solution to most things with ComplexHeatmap is to play around with parameters.
Comment: Reconstruction of locus, order contigs
by
BATMAN
•
0
I do not want to re-annotate the genome. I ask if there is a way to extract the region aligned with the mauve, in .gbk format.
Traffic: 2289 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6