11
votes
13
replies
6.7k
views
7 follow
7
votes
13
replies
800
views
7 follow
0
votes
9
replies
510
views
updated 8 hours ago by
ATpoint
82k
•
written 6 days ago by
hannes.bongartz
•
0
8
votes
9
replies
3.0k
views
7 follow
updated 5 hours ago by
ericrkofman
▴
20
•
written 10.1 years ago by
win
▴
980
3
votes
7
replies
3.9k
views
2
votes
6
replies
283
views
23 hours ago by
anikcropscience
▴
230
1
vote
6
replies
281
views
updated 19 hours ago by
aw7
▴
310
•
written 2 days ago by
LucisTheFather
•
0
4
votes
6
replies
319
views
11 hours ago by
Shicheng Guo
★
9.4k
1
vote
5
replies
208
views
updated 15 hours ago by
Pierre Lindenbaum
162k
•
written 19 hours ago by
NTerway
•
0
2
votes
5
replies
231
views
1
vote
4
replies
388
views
2
votes
4
replies
1.2k
views
19 hours ago by
Aspire
▴
330
0
votes
4
replies
367
views
9 hours ago by
mavy
▴
10
5
votes
4
replies
5.1k
views
6 follow
0
votes
3
replies
190
views
updated 8 hours ago by
ATpoint
82k
•
written 10 hours ago by
shahzaibali
•
0
1
vote
3
replies
217
views
updated 9 hours ago by
Jeremy
▴
910
•
written 1 day ago by
Mohamed Samir
▴
30
7
votes
3
replies
13k
views
updated 22 hours ago by
Akash D
▴
60
•
written 6.5 years ago by
rob.costa1234
▴
310
0
votes
2
replies
612
views
0
votes
2
replies
150
views
1
vote
2
replies
191
views
1
vote
2
replies
133
views
1
vote
2
replies
138
views
0
votes
2
replies
154
views
0
votes
2
replies
201
views
0
votes
1
reply
19
views
0
votes
1
reply
244
views
updated 21 hours ago by
韩雨
•
0
•
written 5 weeks ago by
solomoncharles77
▴
90
1
vote
1
reply
105
views
0
votes
1
reply
123
views
updated 15 hours ago by
Ram
44k
•
written 22 hours ago by
mohamadzare6022
▴
10
0
votes
1
reply
116
views
updated 15 hours ago by
Ram
44k
•
written 1 day ago by
avelarbio46
▴
30
0
votes
1
reply
91
views
0
votes
1
reply
85
views
0
votes
1
reply
106
views
Trying to understand warning from MACS2 about too few paired peaks and differing results in DiffBind
updated 11 hours ago by
jared.andrews07
★
17k
•
written 15 hours ago by
atan
•
0
4
votes
1
reply
123
views
0
votes
1
reply
76
views
0
votes
0
replies
49
views
0
votes
0
replies
93
views
2
votes
0
replies
102
views
0
votes
0
replies
37
views
0
votes
0
replies
36
views
0
votes
0
replies
69
views
updated 15 hours ago by
Ram
44k
•
written 20 hours ago by
emmanouil.a
▴
120
0
votes
0
replies
52
views
0
votes
0
replies
63
views
0
votes
0
replies
59
views
updated 9 hours ago by
Ram
44k
•
written 10 hours ago by
Christopher
▴
10
Recent Votes
Recent Locations •
All
Turkey, just now
France, just now
Russia, 1 minute ago
Germany, 5 minutes ago
India, 6 minutes ago
India, 8 minutes ago
Australia, 12 minutes ago
Recent Awards •
All
Popular Question to
Ruqaiya
•
0
Popular Question to
Philipp Bayer
8.5k
Popular Question to
hashim.rana11
▴
20
Popular Question to
WUSCHEL
▴
760
Popular Question to
ericrkofman
▴
20
Popular Question to
Erika
•
0
Recent Replies
Answer: Does prokka work the same on forward and reverse complementary reads?
by
igmin
•
0
Prokka works the same on both forward and reverse complementary reads. It doesn't matter if your genetic sequences are in their original fo…
Comment: Construction of circos plot from WGS data
by
Anitha
▴
10
Thank you for the information. But, I am still struggling like which data to use and how to process the input data to represent to build th…
Comment: Tools for chromosomal aneuploidy detection
by
cmdcolin
★
3.8k
is there any reason why you do not like tools based on read depths?
Comment: CreateSeuratObject taking very long
by
eae6d2e7
•
0
Thank you for your reply!
I followed your advice to convert to sparse matrix first but I got this error
Error in Matrix::sparseMatrix(raw_…
Answer: Venter Genome Vcf
by
ericrkofman
▴
20
I can't find an hg38 version, and the old VCF seems to be of a different header format so I am having difficulty converting it to hg38 from…
Comment: What is a good way to do gene differentials in single cell data where one group
by
ATpoint
82k
Preferred if you have true biological replicates. Can still be combined with my subsetting strategy, like use 100x different cells for the …
Answer: ComplexHeatmap - How to change fontsize of rowAnnotation
by
ATpoint
82k
```r
set.seed(1)
m = matrix(rnorm(100), nrow = 10)
rownames(m) = 1:10
# normal
ha = rowAnnotation(foo = anno_mark(at=1:nrow(m), labels=row…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
44k
Please do not add answers unless you're actually answering the question. I've moved your post to a comment.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
I still cannot find a way. It seems to be an easy to solve issue and I was trying any possible combination with the aforementioned gp=gpar(…
Comment: What is a good way to do gene differentials in single cell data where one group
by
fracarb8
★
1.6k
I would probably use a pseudobulk approach.
Comment: Error when looping over multiple columns in a data frame in R
by
Jeremy
▴
910
`cutpoint_results[[col_name]]` adds each new cut point to the list entitled "cutpoint_results", while keeping the original column names fr…
Answer: PCA plot no distinct cluster. Only p < 0.05 indicates significant DEGs, while ad
by
swbarnes2
14k
Never use uncorrected p-values with RNASeq.
Your PCA is suggesting that your sample groups are not very different, and the DEG tests con…
Comment: What is a good way to do gene differentials in single cell data where one group
by
ATpoint
82k
I would keep it transparent. Do DE by subsetting large to small group. Do that randomly many times, then either average stats or use some s…
Answer: Trying to understand warning from MACS2 about too few paired peaks and differing
by
jared.andrews07
★
17k
Without looking at the actual sequence for each genome, my guess is that the Echinobase reference just matches much more closely to the org…
Comment: What do the transcript variant # mean in RefSeq?
by
Ram
44k
> It does not seem to be the longest transcript. Is it the canonical transcript?
Longest == canonical. If you're looking for the transcrip…
Traffic: 1678 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6