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comments
41
votes
11
replies
9.7k
views
How To Get Gene Regions +3Kb Upstream
ucsc
gtf
updated 3.4 years ago by
Biostar
20 • written 11.5 years ago by
Stephen
2.8k
63
votes
16
replies
43k
views
11 follow
How To Analyze Imputed Gwas Data
gwas
r
snp
imputation
plink
updated 3.8 years ago by
Mahan
▴ 70 • written 13.0 years ago by
Stephen
2.8k
3
votes
0
replies
14k
views
Comment:
C: How To Show The Name Of Genes On Manhattan Plot
updated 4.5 years ago by
Ram
43k • written 12.7 years ago by
Stephen
2.8k
0
votes
0
replies
3.7k
views
Comment:
C: Public Sources Of Gene Expression Data In Human Adipose Tissue?
updated 4.5 years ago by
Ram
43k • written 12.8 years ago by
Stephen
2.8k
7
votes
5
replies
9.0k
views
Answer:
A: Simple Retrieval Of 1000 Genomes Maf Using Rsids
updated 4.5 years ago by
Ram
43k • written 12.9 years ago by
Stephen
2.8k
2
votes
0
replies
4.8k
views
Comment:
C: Why Does A Rare Variant Need A Large Effect To Be Detected In Gwas?
updated 4.6 years ago by
Ram
43k • written 13.1 years ago by
Stephen
2.8k
57
votes
7
replies
5.1k
views
6 follow
Bioinformatics Cores In A World Of Cloud Computing And Genome Factories
next-gen
sequencing
cloud
core
updated 5.0 years ago by
Jeremy Leipzig
22k • written 12.2 years ago by
Stephen
2.8k
3
votes
0
replies
173k
views
Answer:
A: How Can I Convert Bam To Sam?
updated 5.6 years ago by
Ram
43k • written 12.6 years ago by
Stephen
2.8k
37
votes
17
replies
30k
views
11 follow
Get All The Genes In A Pathway (E.G. Kegg)
kegg
pathway
gwas
gene
updated 5.6 years ago by
Ram
43k • written 12.7 years ago by
Stephen
2.8k
0
votes
0
replies
1.4k
views
Job:
Job: Bioinformatics Analyst at the University of Virginia, Charlottesville, VA, USA
R
RNA-Seq
ChIP-Seq
updated 10 months ago by
Ram
43k • written 5.8 years ago by
Stephen
2.8k
0
votes
0
replies
1.8k
views
Job:
Bioinformatics Analyst in University Virginia Bioinformatics Core
bioconductor
deseq2
r
updated 10 months ago by
Ram
43k • written 5.9 years ago by
Stephen
2.8k
0
votes
1
reply
28k
views
Comment:
C: samtools: error while loading shared libraries: libbz2.so.1.0: cannot open share
6.5 years ago by
Stephen
2.8k
60
votes
9
replies
22k
views
7 follow
Getting Allele Frequencies From 1000 Genomes
genome
hapmap
maf
ucsc
ensembl
updated 7.0 years ago by
Isaac Joseph
▴ 150 • written 13.0 years ago by
Stephen
2.8k
1
vote
0
replies
2.5k
views
Job:
Bioinformatics analyst in University of Virginia Bioinformatics Core
ChIP-Seq
RNA-Seq
R
updated 11 months ago by
Ram
43k • written 7.8 years ago by
Stephen
2.8k
12
votes
6
replies
7.0k
views
Mapping Snps To Genes (And Pathways, Go, Etc.)
pathway
biomart
kegg
ensembl
ncbi
updated 7.9 years ago by
Biostar
20 • written 12.8 years ago by
Stephen
2.8k
1
vote
0
replies
36k
views
Comment:
C: Transcript to gene level count for DEseq(2) use- Salmon/Sailfish/Kallisto etc.
8.6 years ago by
Stephen
2.8k
19
votes
4
replies
14k
views
Rna-Seq With Cuffdiff: Use Merged.Gtf From Cuffmerge Or Combined.Gtf From Cuffcompare?
cufflinks
cuffdiff
rna
gtf
updated 21 months ago by
Ram
43k • written 12.3 years ago by
Stephen
2.8k
0
votes
0
replies
3.2k
views
Comment:
Comment: For R workshop, need bio equivalent of 'diamonds' or 'nycflights13' data.
updated 24 months ago by
Ram
43k • written 9.2 years ago by
Stephen
2.8k
16
votes
5
replies
3.2k
views
Forum:
For R workshop, need bio equivalent of 'diamonds' or 'nycflights13' data.
dplyr
workshop
R
updated 24 months ago by
Ram
43k • written 9.2 years ago by
Stephen
2.8k
15
votes
5
replies
3.7k
views
Public Sources Of Gene Expression Data In Human Adipose Tissue?
gene
updated 9.9 years ago by
Philip Zimmermann
▴ 40 • written 12.8 years ago by
Stephen
2.8k
14
votes
3
replies
6.6k
views
Measuring Conservation For Short Motif
conservation
transcription
updated 10.4 years ago by
jasper1918
▴ 10 • written 12.2 years ago by
Stephen
2.8k
29
votes
15
replies
16k
views
7 follow
Get Flanking Sequence Given A List Of Positions
snp
sequence
biomart
ucsc
galaxy
updated 10.5 years ago by
Biostar
20 • written 13.0 years ago by
Stephen
2.8k
11
votes
4
replies
2.4k
views
Forum:
Myopenid Shutting Down
openid
updated 13 months ago by
Ram
43k • written 10.6 years ago by
Stephen
2.8k
3
votes
0
replies
5.0k
views
Answer:
A: What Are Your Most-Used Public Data Repositories?
10.6 years ago by
Stephen
2.8k
1
vote
0
replies
8.0k
views
Comment:
C: New Free Community Tutorial Website For Bioinformatics Learning
10.7 years ago by
Stephen
2.8k
9
votes
2
replies
11k
views
Answer:
Answer: Automating Gorilla And/Or Revigo Analysis
updated 2.4 years ago by
Ram
43k • written 10.9 years ago by
Stephen
2.8k
2
votes
0
replies
2.7k
views
Answer:
A: Comparing Peaks Coming From Different Peak Calling Programs
11.0 years ago by
Stephen
2.8k
4
votes
0
replies
3.6k
views
Answer:
A: Resources For Video/Webcasts Of Talks/Seminars/Courses
11.0 years ago by
Stephen
2.8k
0
votes
0
replies
14k
views
Comment:
C: Annotating Genomic Intervals
11.5 years ago by
Stephen
2.8k
1
vote
0
replies
14k
views
Comment:
C: Annotating Genomic Intervals
11.5 years ago by
Stephen
2.8k
37
votes
10
replies
14k
views
8 follow
Annotating Genomic Intervals
bedtools
annotation
r
bioconductor
updated 11.5 years ago by
Alex Reynolds
35k • written 11.5 years ago by
Stephen
2.8k
0
votes
0
replies
14k
views
Comment:
C: Annotating Genomic Intervals
11.5 years ago by
Stephen
2.8k
4
votes
1
reply
7.1k
views
Answer:
C: Extract Samples With Specific Rsid And Genotype Using Plink Or Similar Tools
11.5 years ago by
Stephen
2.8k
0
votes
1
reply
19k
views
Comment:
C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
11.6 years ago by
Stephen
2.8k
13
votes
14
replies
19k
views
7 follow
Get Fasta File With Protein Sequences Given Entrez Gene Ids
entrez
eutils
fasta
updated 14 months ago by
Ram
43k • written 11.6 years ago by
Stephen
2.8k
0
votes
1
reply
19k
views
Comment:
C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
11.6 years ago by
Stephen
2.8k
0
votes
0
replies
19k
views
Comment:
C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
11.6 years ago by
Stephen
2.8k
0
votes
1
reply
19k
views
Comment:
C: Get Fasta File With Protein Sequences Given Entrez Gene Ids
11.6 years ago by
Stephen
2.8k
1
vote
4
replies
2.4k
views
Gene Names Of All Proteins Having A Tyrosine Residue
proteomics
updated 11.7 years ago by
Chris Evelo
10k • written 11.7 years ago by
Stephen
2.8k
31
votes
7
replies
17k
views
Cufflinks / Cuffdiff Output - How Are Tests Different?
cufflinks
cuffdiff
galaxy
gene
12.0 years ago by
Stephen
2.8k
8
votes
6
replies
3.6k
views
How To Use Ests To Examine Gene Expression
est
gene
ncbi
updated 12.1 years ago by
Larry_Parnell
16k • written 12.1 years ago by
Stephen
2.8k
12
votes
0
replies
25k
views
Answer:
A: Best Way For A Beginner To Get Up To Speed On Unix Quickly?
12.2 years ago by
Stephen
2.8k
7
votes
0
replies
17k
views
Answer:
A: Cufflinks / Cuffdiff Output - How Are Tests Different?
12.3 years ago by
Stephen
2.8k
0
votes
0
replies
17k
views
Comment:
C: Cufflinks / Cuffdiff Output - How Are Tests Different?
12.3 years ago by
Stephen
2.8k
2
votes
2
replies
8.2k
views
Answer:
A: Geo Data Matrix Using R
12.4 years ago by
Stephen
2.8k
0
votes
0
replies
17k
views
Comment:
C: Cufflinks / Cuffdiff Output - How Are Tests Different?
12.4 years ago by
Stephen
2.8k
5
votes
1
reply
3.0k
views
Answer:
A: Power Calculations: Snp X Environment
12.4 years ago by
Stephen
2.8k
6
votes
1
reply
5.3k
views
Problem With Limma On Two-Color Factorial Design: Coefficients Not Estimable
r
bioconductor
microarray
updated 12.4 years ago by
Ido Tamir
5.2k • written 12.4 years ago by
Stephen
2.8k
5
votes
1
reply
13k
views
Answer:
A: What Are The Obsolete Research Topics In Bioinformatics?
12.6 years ago by
Stephen
2.8k
0
votes
0
replies
30k
views
Comment:
C: Get All The Genes In A Pathway (E.G. Kegg)
12.7 years ago by
Stephen
2.8k
71 results • Page
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