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383
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Comment: Comment: Ciriquant not configuring hisat2 indexed files
11 hours ago by Carlo Yague 8.6k
2
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1
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383
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Answer: Answer: Ciriquant not configuring hisat2 indexed files
6 days ago by Carlo Yague 8.6k
2
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1
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569
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Answer: Answer: Weird Fragment Length distribution multiQC
7 weeks ago by Carlo Yague 8.6k
3
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294
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Answer: Answer: How is strandedness preserved with PCR (DNA/RNA-seq)
7 weeks ago by Carlo Yague 8.6k
2
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1
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669
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Comment: Comment: How to convert raw Nanopore R9 fast5 files to fastq files ?
7 weeks ago by Carlo Yague 8.6k
1
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669
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Answer: Answer: How to convert raw Nanopore R9 fast5 files to fastq files ?
7 weeks ago by Carlo Yague 8.6k
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1.2k
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Comment: Comment: Cannot find summary message after Bowtie2 mapping
5 months ago by Carlo Yague 8.6k
1
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1
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830
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Answer: Answer: How to find coordinates of TSS from 5pUTR and TTS from 3pUTR in transcriptome/ m
11 months ago by Carlo Yague 8.6k
1
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2
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999
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Answer: Answer: feature count command error
11 months ago by Carlo Yague 8.6k
1
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0
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1.2k
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Comment: Comment: tophat2 installation error
11 months ago by Carlo Yague 8.6k
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0
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585
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Comment: Comment: RPKM normalization
11 months ago by Carlo Yague 8.6k
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0
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486
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Comment: Comment: Chip-Seq data for RNA Polymerase 1
11 months ago by Carlo Yague 8.6k
1
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1
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585
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Answer: Answer: RPKM normalization
11 months ago by Carlo Yague 8.6k
3
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1
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619
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Answer: Answer: ERCC normalization within DESeq2
11 months ago by Carlo Yague 8.6k
1
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1
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1.2k
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Answer: Answer: tophat2 installation error
11 months ago by Carlo Yague 8.6k
0
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0
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417
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Comment: Comment: Choosing a term to call my population of organisms for genetic studies
12 months ago by Carlo Yague 8.6k
0
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1
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1.4k
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Answer: Answer: extract gene coordinates and TSS from gene list
12 months ago by Carlo Yague 8.6k
0
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1
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505
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Answer: Answer: DESeq2 replicates in time course data
13 months ago by Carlo Yague 8.6k
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1
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569
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Comment: Comment: Fastq with very poor per tile quality but excellent perbase quality - is this a
17 months ago by Carlo Yague 8.6k
1
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1
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862
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Answer: Answer: I have a question in Size-selection(SPRI) in ChIP-seq library preparation
19 months ago by Carlo Yague 8.6k
3
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0
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585
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Answer: Answer: bedtools
20 months ago by Carlo Yague 8.6k
1
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1
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730
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Answer: Answer: Problem with extracting reverse-reverse read pairs
20 months ago by Carlo Yague 8.6k
0
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0
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2.2k
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Answer: Answer: Supplementary alignments in BAM-file
21 months ago by Carlo Yague 8.6k
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0
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1.9k
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Comment: Comment: How to convert strand specific RNASEQ bam to bigwig
23 months ago by Carlo Yague 8.6k
0
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0
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1.9k
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Comment: Comment: Normalization of RNASeq counts with a reference gene (/genes)
23 months ago by Carlo Yague 8.6k
0
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0
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746
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Comment: Comment: finding coverage of bam file
23 months ago by Carlo Yague 8.6k
1
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2
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746
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Answer: Answer: finding coverage of bam file
23 months ago by Carlo Yague 8.6k
0
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1
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610
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Answer: Answer: [bash] No result file is created after hisat2
23 months ago by Carlo Yague 8.6k
0
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0
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473
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Comment: Comment: how to use custom genome i.e. E. Coli in epic2 ?
23 months ago by Carlo Yague 8.6k
1
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1
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1.5k
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Comment: Comment: How to conclude two genome sequences have the same origin?
23 months ago by Carlo Yague 8.6k
1
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1
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1.5k
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Answer: Answer: How to conclude two genome sequences have the same origin?
23 months ago by Carlo Yague 8.6k
2
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0
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501
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Answer: Answer: Is it possible to find the mutation in RNA-seq reads?
23 months ago by Carlo Yague 8.6k
2
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0
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2.6k
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Comment: Comment: Genes encoded on both strands of DNA?
23 months ago by Carlo Yague 8.6k
3
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1
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2.6k
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Answer: Answer: Genes encoded on both strands of DNA?
23 months ago by Carlo Yague 8.6k
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1
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1.3k
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Comment: Comment: Missing data per site
23 months ago by Carlo Yague 8.6k
1
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0
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1.3k
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Comment: Comment: Can we get an Average Profile of ChIP peaks binding to Transcription "START and
23 months ago by Carlo Yague 8.6k
1
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0
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1.3k
views
Comment: Comment: Missing data per site
23 months ago by Carlo Yague 8.6k
1
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1
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1.3k
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Comment: Comment: Missing data per site
23 months ago by Carlo Yague 8.6k
0
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1
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1.3k
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Comment: Comment: Can we get an Average Profile of ChIP peaks binding to Transcription "START and
24 months ago by Carlo Yague 8.6k
0
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0
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705
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Comment: Comment: PAINS
24 months ago by Carlo Yague 8.6k
0
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1
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1.3k
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Comment: Comment: Can we get an Average Profile of ChIP peaks binding to Transcription "START and
24 months ago by Carlo Yague 8.6k
1
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0
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1.4k
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Comment: Comment: How to edit the fasta headers?
24 months ago by Carlo Yague 8.6k
0
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1
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1.2k
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Comment: Comment: weird alignment results for RNAseq data
24 months ago by Carlo Yague 8.6k
1
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1
reply
888
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Comment: Comment: ncRNA mapping rate to the hg38.nc.fasta
2.0 years ago by Carlo Yague 8.6k
1
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1
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888
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Comment: Comment: ncRNA mapping rate to the hg38.nc.fasta
2.0 years ago by Carlo Yague 8.6k
1
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1
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927
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Comment: Comment: Specific case of "bedtools intersect"
2.0 years ago by Carlo Yague 8.6k
0
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0
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769
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Comment: Comment: GSEA RNASeq
2.0 years ago by Carlo Yague 8.6k
1
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0
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816
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Comment: Comment: huge difference when comparing 2 vcf files from the same sample
2.0 years ago by Carlo Yague 8.6k
0
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1
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769
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Comment: Comment: GSEA RNASeq
2.0 years ago by Carlo Yague 8.6k
8
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1
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2.9k
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Answer: Answer: Bowtie2 and Hisat2 which tool should I use?
2.0 years ago by Carlo Yague 8.6k
978 results • Page 1 of 20
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