Question

Hmmsearch (Hmmer) Tblout Format

0

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10.5 years ago

Andrzej Zielezinski 11k

Hi guys,

do you happen to have, somewhere on your hdds, a sample of tabular output (-tblout) of hmmsearch? I just need to know the number and ordering of columns.

Thanks!

hmmer format parsing • 7.8k views

ADD COMMENT • link updated 10.5 years ago by Manu Prestat 4.1k • written 10.5 years ago by Andrzej Zielezinski 11k

Ram · Accepted Answer · 2013-10-11

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10.5 years ago

Manu Prestat 4.1k

You can find all these details in the HMMer user manual: (chap 5, p37). Contact me directly if you still need an example.

ADD COMMENT • link updated 5.2 years ago by Ram 43k • written 10.5 years ago by Manu Prestat 4.1k

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Excellent! Thank you, Manu!

ADD REPLY • link updated 5.2 years ago by Ram 43k • written 10.5 years ago by Andrzej Zielezinski 11k