Acquiring Chromosomal Location (Cytoband) For A Large Set Of Genes

Question

[mehran.karimzade]

I have a large set of genes, and need to acquire chromosomal location (in 1p12.2 format) Does anyone know if there is a website or software package that can do that?

Your help is appreciated.

Answer 1

[Pierre Lindenbaum]

duplicate of

How to obtain chromosome locus from coordinates

use the ucsc cytobands http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/cytoBand.txt.gz and bedtools

[mehran.karimzade]

Thank you very much Pierre. But now I need to obtain chromosomal position for each of my genes. Can you tell me how this can be done?

[Pierre Lindenbaum]

search biostars.org please. This question has been asked many times.