Gene expression profile analysis

Question

[mxlsherry1992]

Dear all, I want to draw a graph like the attached picture, the axis is the several timepoint used for RNA sequencing, I want to draw all the genes expression profile cluster to find the genes that have same expression profile. Could you please tell me which software can help realize that? Thank you!: 😊

Answer 1

[Prakash]

There is another tool called short-time series expression miner

Answer 2

[Woa]

MFUZZ

MFUZZ: Soft clustering of time series gene expression data

Answer 3

[Ron]

Also EBseq. http://bioconductor.org/packages/release/bioc/html/EBSeq.html It provides different possible patterns between multiple conditions.