Entering edit mode
5.0 years ago
zion22
▴
70
Hi, sorry to bother you. I ask in this forum why maybe someone can help me, some of you know how I could extract polyformisms non synonymous using SnpSift? and if you have an example of the command I appreciated it very much. Thank you
Hi. Thank you so much for helping me. but I have a problem, when I run the next command:
when I compare the two files, original and filtered, are exactly the same, even when I change the filter parameter NON_SYNYMOUS_CODING to SYNONYMOUS_CODING the output file is the same. if you know what I could do it would be great since I have to do it with 10 other vcf files and I have the same problem
Can you share a snippet of the vcf file including the header?