Variant Effect Prediction Databases
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5.1 years ago
cocchi.e89 ▴ 270

Dear all,

I have to find the predicted effect of a large sample of variants, I know about GnomAD VEP annotation but some of them are absent in GnomAD. How could I try to retrieve those variants effect? Other Databases etc?

PS: I have to integrate it into a pipeline so I need some source database, can not operate just with some webpage consultation

Thanks a lot in advance for any help!
variant effect prediction database • 845 views
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SNV, SV? Coding, non-coding?

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basically SNV/INDEL in exome studies, but I would appreciate so much even broader comments

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