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6.3 years ago
rahel14350
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40
I used the mean methylation value and Wilcox test to define differentially methylated regions between two groups of RRBS data. Is there any way that I could import the Granges from DMRs to RnBeads to annotate them there? Or do you have any suggestion for which package I could use only for annotation of DMRs to promotors, genes and ....!
Many thanks, Rahel
I used package annotatr and it helped me. https://bioconductor.org/packages/release/bioc/vignettes/annotatr/inst/doc/annotatr-vignette.html