get error from running any command on RnBeads when reopen R
0
0
Entering edit mode
6.4 years ago
sugus ▴ 150

Hi there, I am learning how to use RnBeads to perform methylation analysis and make some practise from RnBeads.pdf document. Last night I have get some results and save my R image like:

save.image(file="F:/Bioinformatics/Su/test/test.RData")

When I reopen my R from test.RData this morning, it seems all data exist in R enviroment including Directory path and intermediate results. However, I cannot run any command, if so I get an error like:

nrow(meth(rnb.set.unfiltered)) # the number of sites in the unfiltered object
Error: Not all file.access(filename, 0) == 0 is TRUE

For now, I have no idea how to continue my work if I have to shut down R. It seems that I have to clear my report and start over. Thus is there something missing when I want to save the result that already get?

Thanks for anyone who could give me a gint and I am gonna start over now :(

RnBeads R • 1.1k views
ADD COMMENT

Login before adding your answer.

Traffic: 2870 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6