Independent and Dependent Variables

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6.9 years ago

saj98 ▴ 140

Hello everyone

I have RNA seq data, I am interested to Identifying Independent and Dependent Variables between two groups. Except PCA, is there any way to calculate that?

I appreciate your time and help Shaima

R RNA-Seq • 1.9k views

ADD COMMENT • link 6.9 years ago by saj98 ▴ 140

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Umm, what?

ADD REPLY • link 6.9 years ago by Devon Ryan 104k

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Do you mean finding genes or features which are differentially expressed between groups? The "measure independent variable to get unique values" is a bit confusing.

ADD REPLY • link 6.9 years ago by VHahaut ★ 1.2k

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Independent and dependent variables on wikipedia.

ADD REPLY • link 6.9 years ago by Jean-Karim Heriche 27k

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Hi, you are using an non-standard lingo it seems. I understand you want to look for internal correlation rather than independent-dependent random variables which would be defined by the experimental setup a priori.

ADD REPLY • link 6.9 years ago by Michael 54k

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Yes, exactly you understood what I meant. Would you be able to guide me how to set up these parameters?

I appreciate your answer

ADD REPLY • link 6.9 years ago by saj98 ▴ 140

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