PhyML phylogeny error :
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Entering edit mode
7.1 years ago
jeccy.J ▴ 60

Does Anyone have experienced this error while running PhyML

phyml -i test_alignment_phyml.phylip -s BOTH -o tlr -m GTR -c 4 -b 100 -v 0 --no_memory_check --print_site_lnl --run_id gtr_cat4

. (26136 sec) [ -10076226.9329] [985239] [depth= 1]

. (26218 sec) [ -10076226.9323] [985239] [depth= 1]

. (26360 sec) [ -10076226.9398] [985239] [depth= 1]

. (26908 sec) [ -10076226.8769] [985239] [depth= 1]

. (27205 sec) [ -10076227.1571] [985239] [depth= 1]

. (27438 sec) [ -10076227.1416] [985239] [depth= 1]

. (27501 sec) [ -10076227.0299] [985239] [depth= 1]

. (27604 sec) [ -10076227.2369] [985239] [depth= 1]

. (27714 sec) [ -10076227.2157] [985239] [depth= 1]

. (27806 sec) [ -10076227.1604] [985239] [depth= 1]

. (27887 sec) [ -10076227.1540] [985239] [depth= 1]

. (27978 sec) [ -10076227.7724] [985239] [depth= 1]

. (28044 sec) [ -10076228.0959] [985241] [depth= 1]

. (28154 sec) [ -10076218.8491] [985239] [depth= 1]

. (28518 sec) [ -10076212.7056] [985239] [depth= 1]

. (28580 sec) [ -10076212.7032] [985239] [depth= 1]

. (28619 sec) [ -10076212.8432] [985239] [depth= 1]

. (28709 sec) [ -10076212.8853] [985239] [depth= 1]

. (28913 sec) [ -10076212.8284] [985239] [depth= 1]

. (29195 sec) [ -10076149.7358] [985271] [depth= 3]

. (29280 sec) [ -10075867.3482] [985202] [depth= 2]

. (29496 sec) [ -10074853.9286] [984853] [depth= 1]

. (29813 sec) [ -10074524.3572] [984721] [depth= 1]

. (30580 sec) [ -10074524.3272] [984716] [depth= 1]

. Best_move < 0 !

. List size = 2

. 0x234734170 0xfbd0a0

. 0x234632ff0 0xfbd310

== Err. in file spr.c at line 4166 (function 'Evaluate_List_Of_Regraft_Pos_Triple')

Phylogeny • 1.5k views
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