Question

Cancer RNA-seq data

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7.7 years ago

JJ ▴ 670

Hi all,

Do you know of any large-scale sequencing projects which contain cancer RNA-seq data apart from TCGA, 1000Genomes, Encode and TARGET? Suggestions are very much appreciated!

Thank you! Best, Julia

RNA-seq • 2.2k views

ADD COMMENT • link updated 7.7 years ago by mkulecka ▴ 360 • written 7.7 years ago by JJ ▴ 670

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CCLE? If interested in cancer cell lines as well..

ADD REPLY • link 7.7 years ago by Amitm ★ 2.2k

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Thank you! I am more interested in cancer patient data - ideally with clinical data.

ADD REPLY • link 7.7 years ago by JJ ▴ 670

score 1 · Answer 1 · 2016-08-08

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7.7 years ago

mkulecka ▴ 360

Something by genentech? These are cancer lines as well.

Cancer-related projects in Expression Atlas.

ADD COMMENT • link 7.7 years ago by mkulecka ▴ 360

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Thank you! I am more interested in cancer patient data - ideally with clinical data.

ADD REPLY • link 7.7 years ago by JJ ▴ 670