Alternative splicing events in transcriptomic data

Question

[waqaskhokhar999]

I have transcriotome data.... how can we identify the alternative splicing events from sam file?

Answer 1

[igor]

Previously discussed at length here:

• Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
• Best Approach To Predict Novel And Alternative Splicing Events From Rna-Seq Data