Deleted:Detecting orthologs in bacterial genomes - step by step guide with OrthoMCL, Blast and MCL

Question

[shilparaopradeep]

One of the most popular and powerful tools in bioinformatics suitable for ortholog detection is OrthoMCL. Nevertheless, it is also one of the most difficult to install and run tools, because it requires many dependencies including BLAST and MySQL database. With InsideDNA platform, we made OrthoMCL as easy as possible to work with and describe below the entire pipeline for ortholog detection in genomes of three bacterial species of Ralstonia. In total, it takes about 10 minutes to run the entire pipeline on three bacterial genomes.

1. Input data
2. Compile all tools into a single project
3. Running orthomclAdjustFasta (click to run)

Understand in detail http://bit.ly/1pmA82c