Where to find p-values for GWAS articles
1
2
Entering edit mode
8.5 years ago

I came across this website infinome.me which relates SNPs to a few different diseases. On their site, if you click on a pubmed article, they give you a list of all the SNPs mentioned in that article along with the p-value (relating the SNP to the disease). Here's a screenshot:

screenshot

^^ scroll to the right to see full image.

Is there an online database where I can download this kind of information, like for example if I'm interested in schizophrenia, I can get some articles with the list of SNPs they tested and their corresponding p-values?

GWAS p-value • 3.3k views
ADD COMMENT
0
Entering edit mode

Grasp is exactly what I was looking for, thanks!

ADD REPLY
0
Entering edit mode

looks more like an odds ratio rather than a p-value.

ADD REPLY
0
Entering edit mode

They are log-p values. I need to fix some legends!

Let me know if you guys have any user interface requests.

ADD REPLY
2
Entering edit mode
8.5 years ago

Try Grasp or GWAS central.

ADD COMMENT

Login before adding your answer.

Traffic: 2406 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6