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Swiss-Prot > Ensembl 1:many
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14 months ago
cdsouthan ♦ 1.8k

I was mapping some GPCRs from UniProt > Ensembl using Biomart

So whats the explanation for below ? (and others)

Q9UBS5 ENSG00000237112
Q9UBS5 ENSG00000206511
Q9UBS5 ENSG00000232569
Q9UBS5 ENSG00000237051
Q9UBS5 ENSG00000204681
Q9UBS5 ENSG00000232632
Q9UBS5 ENSG00000206466
Q9UBY5 ENSG00000171517

Ensembl • 880 views
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13 months ago
EMBL-EBI

The genes are on haplotypes on the MHC locus.

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Ta (useful hap video BTW)

But HGNC and Entrez Gene only give ENSG00000204681 from primary assmbly

So from 20,203 human Swiss-Prots how many are primary assembly singletons but multimappers in haplotypes or patches ?

Would be good to have this as a select option in BioMart and UniProt x-refs ?

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