0
votes
0
replies
1
view
0
votes
1
reply
24
views
updated 12 minutes ago by
Pierre Lindenbaum
161k
•
written 48 minutes ago by
Dylan
•
0
0
votes
0
replies
6
views
0
votes
1
reply
20
views
updated 10 minutes ago by
Pierre Lindenbaum
161k
•
written 52 minutes ago by
Lada
▴
30
3
votes
10
replies
284
views
3
votes
6
replies
279
views
0
votes
0
replies
14
views
2 hours ago by
ohtang7
▴
40
0
votes
0
replies
25
views
2
votes
0
replies
40
views
updated 2 hours ago by
Ram
43k
•
written 2 hours ago by
carlopecoraro2
★
2.5k
795
votes
167
replies
141k
views
109 follow
updated 3 months ago by
Biostar
2.7k
•
written 7.4 years ago by
Istvan Albert
100k
2
votes
2
replies
336
views
updated 3 hours ago by
Pierre Lindenbaum
161k
•
written 8 months ago by
AshleeThomson
▴
80
0
votes
1
reply
66
views
7
votes
5
replies
4.6k
views
0
votes
4
replies
136
views
5
votes
3
replies
514
views
updated 5 hours ago by
colindaven
6.4k
•
written 5 days ago by
kirillkirilenko
▴
40
0
votes
0
replies
34
views
0
votes
3
replies
307
views
0
votes
0
replies
39
views
1
vote
3
replies
135
views
0
votes
3
replies
135
views
0
votes
1
reply
95
views
updated 7 hours ago by
Michael
54k
•
written 8 hours ago by
michael.flower.14
▴
180
0
votes
2
replies
106
views
0
votes
1
reply
63
views
updated 2 hours ago by
bk11
★
2.3k
•
written 8 hours ago by
Susmita Mandal
▴
110
0
votes
1
reply
78
views
updated 6 hours ago by
GenoMax
141k
•
written 9 hours ago by
sarahawan92
▴
10
0
votes
3
replies
438
views
updated 9 hours ago by
atharvakarkare14
▴
10
•
written 4 days ago by
Ashok
•
0
1
vote
1
reply
105
views
0
votes
1
reply
101
views
updated 9 hours ago by
Basti
★
2.0k
•
written 12 hours ago by
qudrat.nii
▴
10
0
votes
0
replies
75
views
Forum:
Improvement on automatic annotation of single-cell RNA-seq data from the literature using LLM
13 hours ago by
yxwucq
•
0
0
votes
0
replies
58
views
0
votes
0
replies
44
views
0
votes
5
replies
203
views
updated 18 hours ago by
Pierre Lindenbaum
161k
•
written 21 hours ago by
Sd
•
0
0
votes
2
replies
133
views
20 hours ago by
sainavyav22
•
0
0
votes
1
reply
101
views
updated 22 hours ago by
Ram
43k
•
written 22 hours ago by
Cameron.walker9900
•
0
0
votes
8
replies
233
views
1
vote
4
replies
166
views
updated 22 hours ago by
Mensur Dlakic
★
27k
•
written 23 hours ago by
Κοσμάς
•
0
0
votes
0
replies
76
views
updated 22 hours ago by
Ram
43k
•
written 22 hours ago by
maxime.policarpo
▴
200
3
votes
3
replies
140
views
0
votes
0
replies
63
views
0
votes
2
replies
121
views
21 hours ago by
dxj294
•
0
0
votes
0
replies
68
views
0
votes
0
replies
105
views
1
vote
3
replies
2.4k
views
updated 20 hours ago by
chrchang523
10k
•
written 6.1 years ago by
Ginevra
▴
10
2
votes
1
reply
111
views
updated 1 day ago by
ATpoint
81k
•
written 1 day ago by
catherine.teyssier
•
0
2
votes
3
replies
159
views
10 hours ago by
michelafrancesconi9
▴
20
0
votes
0
replies
71
views
1
vote
4
replies
169
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
marco.barr
▴
80
2
votes
3
replies
297
views
updated 1 day ago by
dsull
★
5.8k
•
written 14 days ago by
javanokendo
▴
60
0
votes
1
reply
112
views
0
votes
2
replies
163
views
3
votes
3
replies
185
views
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 3 minutes ago
Morocco, 3 minutes ago
Canada, 4 minutes ago
United States, 4 minutes ago
Poland, 5 minutes ago
Bangkok, 6 minutes ago
Recent Awards •
All
Great Question to
Ann
★
2.4k
Scholar to
marco.barr
▴
80
Popular Question to
Kash
▴
110
Popular Question to
pfee418
▴
10
Popular Question to
sarahmanderni
▴
100
Recent Replies
Answer: Difference between samtools "-f 9" and "-f 11"
by
Pierre Lindenbaum
161k
9: read must be paired AND mate must be unmapped
11: read must be paired AND mapped in proper pair AND mate must be unmapped (which is w…
Comment: How to convert plink files to Hapmap Format
by
Sofia
•
0
the data is binary and associated with a disease but we're studying only the cases and there are other phenotypes of severity
Comment: Cell barcode whitelists for DNBelab C Series High-throughput Single-cell RNA Ser
by
atowns21
•
0
@benjamin.pyenson could you share an example command of using STARSolo for the alignment? Did you use the json file directly? Or do you hav…
Comment: How to trim transcripts using information from NCBI contamination screen report
by
GenoMax
141k
> I didn't do a good job with Trimmomatic for some reason so I have to do some trimming of my transcripts.
If you had extraneous sequence…
Comment: How to convert plink files to Hapmap Format
by
bk11
★
2.3k
Please answer my above question. What type of data is it, binary (cases and controls) or quantitative? You need to update Phenotype info in…
Comment: How to convert plink files to Hapmap Format
by
Sofia
•
0
This is how my .fam file looks like ![enter image description here][1]
[1]: /media/images/caccd97c-3606-48d2-aa32-423a9882
And I run …
Comment: How to convert plink files to Hapmap Format
by
bk11
★
2.3k
What type of phenotype is in your data? It looks like it does not have affection status (default values for affection status will be: 1 = u…
Comment: Redirection of Duplicate PMIDs
by
LauferVA
4.2k
Agree. This is also a great solution that flips the problem on its head, as it were, Dominick. I dont want to be preachy, but this is why i…
Answer: Redirection of Duplicate PMIDs
by
GenoMax
141k
> linked to a list of grants
Using [**EntrezDirect**][1] this may be much simpler if you have the grant number available. I tested this w…
Answer: Redirection of Duplicate PMIDs
by
LauferVA
4.2k
Hi Dominick,
One thing I am not sure of is, how is it that you got the other PMID in the first place?
The reason I ask is that you mentio…
Comment: How to convert plink files to Hapmap Format
by
Sofia
•
0
Thanks Marco, btw do you have any idea why I get this "Warning: Skipping --assoc/--model since less than two phenotypes are present." aft…
Comment: Subset Seurat object from Xenium spatial data
by
bk11
★
2.3k
For subsetting a sample, you can do something like this-
Idents(seuratObj) <- "orig.ident"
subj1 <- c("subject_1")
subj1_seur…
Comment: Redirection of Duplicate PMIDs
by
LauferVA
4.2k
Ok! I have a recommendation. I'll submit it as an answer, pending your feedback.
vincent
Comment: DYH17 Structure Prediction
by
anasjamshed
▴
120
In modeller we need to use templates as well.so 63% is acceptable
Comment: DYH17 Structure Prediction
by
Ram
43k
Mensur said
> The latter option assumes you know how to use Modeller
Do you know how to use Modeller? I vaguely recall there being a mini…
Traffic: 2889 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6