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`bbduk.sh` can use the transcripts as input. There is a `adapters.fa` included in the `resources` directory of the distribution. You can do…
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Cross posted here (including the code used to make up the counts):
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RSEM returns a kind of p-value if you run it with the "prior-enhanced" option. Did you do that? Are you completely sure that's the value y…
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i checked both of these programs (`bbduk` and `fastp`) and it seems they use reads as inputs (fastq formats)... how can I trim my transcrip…
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He is already giving 32G, 320G for marking duplicates for exome is excessive. Is there a specific reason for using the tool?
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This looks good. Please try with using `--allow-no-sex flag`
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Please show me a few lines of phenotype updated .fam file. You can do `head
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yes sure !
![enter image description here][1]
[1]: /media/images/f0f94f6c-4387-4188-a1aa-19152a89
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Give it more memory.
~10x more memory, or whatever you can give it,
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Thanks! I've already tried looking through these files, I need release 83. I am trying to find this information in the .catalog file of the…
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Possibly. You will need to know the RefSeq release version. Check in this directory: https://ftp.ncbi.nlm.nih.gov/refseq/release/release-ca…
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Hey, can you please show me a few lines of your phenotype updated .fam file? I m seeing there are 7 columns in it, that might be the proble…
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