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http://qualimap.conesalab.org/doc_html/index.html
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You can simply impute your genotyped data in TOPMed server. In that way you do not have to deal with downloading the reference panels (not …
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Thank you. That is what I ended up doing.
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Thanks for your response! I have no statistics background so a bit hard to figure our the equation you provide with. I just want to find so…
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`\t` is tab
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Thanks. If I understand correctly, this adds ID1 to the rg header in the first bam, etc. Could you please explain the syntax of the tsM:SAM…
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not tested:
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Could you please direct me to an example which uses addreplacerg across an entire bamfile (i.e. I would need to add a read group tag for ea…
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> I'm not sure how and where to best implement the suggested corrections of fixing the SM tag
use to change the read group of one or more …
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