Biostar Beta. Not for public use.
5heikki ♦ 8.4k
Role: Moderator
Status: New
Handle: @5heikki9490
Reputation: 8420
Email: h*********@gmail.com
Joined: 17 months ago
Last seen: 18 months ago
Location: Finland

about me

Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
Votes
1
Reply
6.5k
Views
Answer: A: Extraction of first sequences from a big fasta file
5.8 years ago
5heikki 8.4k • updated 17 months ago
RamRS 21k
0
Votes
1
Reply
176
Views
Comment: C: Rename fasta headers from CSV
18 months ago
5heikki 8.4k
0
Votes
1
Reply
188
Views
Comment: C: intersection for several file
18 months ago
5heikki 8.4k
0
Votes
0
Replies
233
Views
Comment: C: What does it mean if a gene is not found in an assembly?
18 months ago
5heikki 8.4k
0
Votes
1
Reply
233
Views
Comment: C: What does it mean if a gene is not found in an assembly?
18 months ago
5heikki 8.4k
0
Votes
2
Replies
233
Views
Comment: C: What does it mean if a gene is not found in an assembly?
18 months ago
5heikki 8.4k
0
Votes
1
Reply
233
Views
Comment: C: What does it mean if a gene is not found in an assembly?
18 months ago
5heikki 8.4k
0
Votes
1
Reply
233
Views
Comment: C: What does it mean if a gene is not found in an assembly?
19 months ago
5heikki 8.4k
0
Votes
0
Replies
248
Views
Answer: A: FastQC results interpretation
19 months ago
5heikki 8.4k
2
Votes
0
Replies
2.1k
Views
Comment: C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
20 months ago
5heikki 8.4k
1
Vote
5
Replies
229
Views
What's going on with the NCBI ftp?
NCBI
20 months ago
5heikki 8.4k
0
Votes
1
Reply
2.1k
Views
Comment: C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
20 months ago
5heikki 8.4k
0
Votes
1
Reply
294
Views
Comment: C: Include STOP codon in getorf output
20 months ago
5heikki 8.4k
0
Votes
0
Replies
229
Views
Comment: C: What's going on with the NCBI ftp?
20 months ago
5heikki 8.4k
0
Votes
1
Reply
229
Views
Comment: C: What's going on with the NCBI ftp?
20 months ago
5heikki 8.4k
0
Votes
0
Replies
233
Views
Comment: C: Computer science grad student looking for advice/suggestions for master's thesis
20 months ago
5heikki 8.4k
0
Votes
1
Reply
403
Views
Comment: C: How to get a half correlation matrix?
20 months ago
5heikki 8.4k
0
Votes
1
Reply
224
Views
Comment: C: centos and bowtie2
20 months ago
5heikki 8.4k
0
Votes
0
Replies
505
Views
Comment: C: Can we consider Bioinformatics as a engineering discipline?
20 months ago
5heikki 8.4k
0
Votes
1
Reply
157
Views
Comment: C: Retrieving several bacteria CDS
20 months ago
5heikki 8.4k
1
Vote
1
Reply
157
Views
Comment: C: Retrieving several bacteria CDS
20 months ago
5heikki 8.4k
0
Votes
1
Reply
224
Views
Answer: A: centos and bowtie2
20 months ago
5heikki 8.4k
1
Vote
1
Reply
394
Views
Comment: C: Binning Tools for Long Reads/Contigs
20 months ago
5heikki 8.4k
0
Votes
1
Reply
394
Views
Comment: C: Binning Tools for Long Reads/Contigs
20 months ago
5heikki 8.4k
0
Votes
1
Reply
394
Views
Comment: C: Binning Tools for Long Reads/Contigs
20 months ago
5heikki 8.4k
1
Vote
0
Replies
183
Views
Comment: C: Blasting against all assemblies on NCBI without downloading the genomes
20 months ago
5heikki 8.4k
0
Votes
0
Replies
362
Views
Comment: C: Are parasites good as model organisms?
20 months ago
5heikki 8.4k
0
Votes
1
Reply
362
Views
Comment: C: Are parasites finally good for something?
20 months ago
5heikki 8.4k
0
Votes
1
Reply
394
Views
Comment: C: Binning Tools for Long Reads/Contigs
20 months ago
5heikki 8.4k
2
Votes
1
Reply
243
Views
Answer: A: How to rename duplicate fasta headers after the first underscore '_'?
21 months ago
5heikki 8.4k
1
Vote
0
Replies
408
Views
Answer: A: How to create a tab delimited file?
21 months ago
5heikki 8.4k
0
Votes
0
Replies
160
Views
Comment: C: Cross assembly of metagenomics
21 months ago
5heikki 8.4k
0
Votes
0
Replies
426
Views
Comment: C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
21 months ago
5heikki 8.4k
3
Votes
1
Reply
263
Views
Answer: A: How do I get a single nucleotide from my BLAST alignment?
21 months ago
5heikki 8.4k
0
Votes
0
Replies
263
Views
Comment: C: How do I get a single nucleotide from my BLAST alignment?
21 months ago
5heikki 8.4k
0
Votes
2
Replies
426
Views
Comment: C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
21 months ago
5heikki 8.4k
0
Votes
1
Reply
263
Views
Comment: C: How do I get a single nucleotide from my BLAST alignment?
21 months ago
5heikki 8.4k
0
Votes
1
Reply
426
Views
Comment: C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
21 months ago
5heikki 8.4k
0
Votes
1
Reply
426
Views
Comment: C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
21 months ago
5heikki 8.4k
1
Vote
0
Replies
217
Views
Comment: C: Roary MSG: Got a sequence without letters. Could not guess alphabet
21 months ago
5heikki 8.4k
1
Vote
1
Reply
240
Views
Comment: C: Local Blast Error
21 months ago
5heikki 8.4k
0
Votes
1
Reply
248
Views
Comment: C: BLAST Database error: No GIs were found in BLAST database
21 months ago
5heikki 8.4k
2
Votes
0
Replies
208
Views
Answer: A: Shell script to reverse complement DNA, but with a twist (certain bases with a l
21 months ago
5heikki 8.4k
0
Votes
0
Replies
328
Views
Comment: C: Only one hit per query on blastn?
21 months ago
5heikki 8.4k
1
Vote
0
Replies
1.1k
Views
Answer: A: Survey: What colour theme do you use in your terminal?
21 months ago
5heikki 8.4k
2
Votes
1
Reply
16k
Views
Comment: C: BLAST, setting maximum number of hits
5.8 years ago
5heikki 8.4k • updated 21 months ago
RamRS 21k
6
Votes
1
Reply
16k
Views
Answer: A: BLAST, setting maximum number of hits
5.8 years ago
5heikki 8.4k • updated 21 months ago
RamRS 21k
0
Votes
1
Reply
224
Views
Answer: A: MS level RESEARCH IDEA
21 months ago
5heikki 8.4k
1
Vote
0
Replies
229
Views
Comment: C: Is there a way to segregate Plasmid contigs from Iontorrent WGS data?
21 months ago
5heikki 8.4k
1
Vote
1
Reply
229
Views
Answer: A: Is there a way to segregate Plasmid contigs from Iontorrent WGS data?
21 months ago
5heikki 8.4k
0
Votes
0
Replies
402
Views
Comment: C: Linearize fasta files
21 months ago
5heikki 8.4k
1
Vote
1
Reply
253
Views
Comment: C: 16S rRNA extraction of assembled genome bins
21 months ago
5heikki 8.4k
0
Votes
0
Replies
241
Views
Comment: C: Software to extract run information from FASTQ headers?
21 months ago
5heikki 8.4k
0
Votes
1
Reply
241
Views
Comment: C: Software to extract run information from FASTQ headers?
21 months ago
5heikki 8.4k
1
Vote
1
Reply
382
Views
Comment: C: How to extract the last 1000 nt from a group of sequences in a FASTA file?
21 months ago
5heikki 8.4k
1
Vote
1
Reply
382
Views
Answer: A: How to extract the last 1000 nt from a group of sequences in a FASTA file?
21 months ago
5heikki 8.4k
0
Votes
0
Replies
376
Views
Answer: A: Reduce number of reads from 100M to 50M in the sample from the existing RNA-Seq
21 months ago
5heikki 8.4k
0
Votes
0
Replies
202
Views
Answer: A: Metagenomics raw data to develop pipeline
21 months ago
5heikki 8.4k
0
Votes
0
Replies
169
Views
Comment: C: MEGAN - no reads found
22 months ago
5heikki 8.4k
0
Votes
0
Replies
270
Views
Comment: C: Senior Software Engineer
22 months ago
5heikki 8.4k
1
Vote
0
Replies
283
Views
Answer: A: How to predict complementary nucleotide sequence?
22 months ago
5heikki 8.4k
0
Votes
0
Replies
325
Views
Comment: C: Sorting out CD HiT output
22 months ago
5heikki 8.4k
0
Votes
0
Replies
294
Views
Comment: C: Include STOP codon in getorf output
22 months ago
5heikki 8.4k
0
Votes
0
Replies
294
Views
Comment: C: Include STOP codon in getorf output
22 months ago
5heikki 8.4k
0
Votes
0
Replies
294
Views
Comment: C: Include STOP codon in getorf output
22 months ago
5heikki 8.4k
0
Votes
2
Replies
325
Views
Comment: C: Sorting out CD HiT output
22 months ago
5heikki 8.4k
2
Votes
1
Reply
286
Views
Answer: A: How To Rename FASTA Headers
22 months ago
5heikki 8.4k
0
Votes
0
Replies
325
Views
Answer: A: Sorting out CD HiT output
22 months ago
5heikki 8.4k
1
Vote
1
Reply
275
Views
Comment: C: How to write a code in Linux to manipulate a large file with grep/awk
22 months ago
5heikki 8.4k
3
Votes
1
Reply
304
Views
Comment: C: Bowtie2 mapped just 50% of the reads
22 months ago
5heikki 8.4k
0
Votes
0
Replies
304
Views
Comment: C: Memory-driven computing accelerates genomic data processing
22 months ago
5heikki 8.4k
1
Vote
0
Replies
303
Views
Comment: C: Metagenomics best reference DB
22 months ago
5heikki 8.4k
0
Votes
0
Replies
304
Views
Comment: C: Memory-driven computing accelerates genomic data processing
22 months ago
5heikki 8.4k
1
Vote
0
Replies
303
Views
Comment: C: Metagenomics best reference DB
22 months ago
5heikki 8.4k
1
Vote
1
Reply
303
Views
Comment: C: Metagenomics best reference DB
22 months ago
5heikki 8.4k
2
Votes
2
Replies
303
Views
Answer: C: Metagenomics best reference DB
22 months ago
5heikki 8.4k
0
Votes
2
Replies
304
Views
Comment: C: Memory-driven computing accelerates genomic data processing
22 months ago
5heikki 8.4k
1
Vote
8
Replies
304
Views
Forum: Memory-driven computing accelerates genomic data processing
HPC Forum
22 months ago
5heikki 8.4k
0
Votes
0
Replies
328
Views
Comment: C: for loop over bwa aln
22 months ago
5heikki 8.4k
1
Vote
1
Reply
267
Views
Answer: A: blast against metagenome shotgun data - not getting the hits expected
22 months ago
5heikki 8.4k
0
Votes
0
Replies
353
Views
Answer: A: Career related query
23 months ago
5heikki 8.4k
0
Votes
1
Reply
335
Views
Comment: C: How can Investigate if a Viral genome is circular or linear? And if it is single
24 months ago
5heikki 8.4k
3
Votes
1
Reply
335
Views
Answer: A: How can Investigate if a Viral genome is circular or linear? And if it is single
24 months ago
5heikki 8.4k
0
Votes
0
Replies
238
Views
Comment: C: How do we call this phenomenon in evolution?
24 months ago
5heikki 8.4k
5
Votes
4
Replies
38k
Views
Comment: C: Download All The Bacterial Genomes From Ncbi
4.7 years ago
5heikki 8.4k • updated 2.0 years ago
RamRS 21k
2
Votes
1
Reply
998
Views
Comment: C: Binning of reads vs. binning of contigs in metagenomics
2.0 years ago
5heikki 8.4k
2
Votes
1
Reply
998
Views
Comment: C: Binning of reads vs. binning of contigs in metagenomics
2.0 years ago
5heikki 8.4k
0
Votes
0
Replies
253
Views
Comment: C: Don't understand the assignment - Artemis
2.1 years ago
5heikki 8.4k
1
Vote
0
Replies
346
Views
Comment: C: standalone blast output to excel
2.1 years ago
5heikki 8.4k
1
Vote
1
Reply
234
Views
Answer: A: Is there a database of phylogenetic information?
2.1 years ago
5heikki 8.4k
0
Votes
0
Replies
1.8k
Views
Comment: C: Misunderstood parameter of NCBI BLAST
2.1 years ago
5heikki 8.4k
3
Votes
1
Reply
532
Views
Comment: C: -max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
2.1 years ago
5heikki 8.4k
4
Votes
3
Replies
532
Views
News: -max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
software error blast News
2.1 years ago
5heikki 8.4k • updated 2.1 years ago
Devon Ryan 90k
0
Votes
0
Replies
811
Views
Comment: C: Workstation : More RAM or Faster RAM
2.1 years ago
5heikki 8.4k
0
Votes
1
Reply
646
Views
Comment: C: Missing sequences in local NT database
2.1 years ago
5heikki 8.4k
1
Vote
0
Replies
314
Views
Comment: C: primers for whole metagenome
2.1 years ago
5heikki 8.4k
1
Vote
0
Replies
314
Views
Comment: C: primers for whole metagenome
2.1 years ago
5heikki 8.4k
1
Vote
2
Replies
646
Views
Comment: C: Missing sequences in local NT database
2.1 years ago
5heikki 8.4k
0
Votes
2
Replies
646
Views
Comment: C: Missing sequences in local NT database
2.1 years ago
5heikki 8.4k
0
Votes
2
Replies
646
Views
Comment: C: Missing sequences in local NT database
2.1 years ago
5heikki 8.4k
Powered by the version 2.3.1