Biostar Beta. Not for public use.
5heikki ♦ 8.4k
Role: Moderator
Status: New
Handle: @5heikki9490
Reputation: 8420
Email: h*********@gmail.com
Joined: 10 months ago
Last seen: 10 months ago
Location: Finland

about me

Posts Awards
2
Votes
1
Reply
6.5k
Views
A: Extraction of first sequences from a big fasta file
5.1 years ago
5heikki 8.4k • updated 10 months ago
RamRS 21k
0
Votes
1
Reply
149
Views
C: Rename fasta headers from CSV
10 months ago
5heikki 8.4k
0
Votes
1
Reply
163
Views
C: intersection for several file
10 months ago
5heikki 8.4k
0
Votes
0
Replies
207
Views
C: What does it mean if a gene is not found in an assembly?
11 months ago
5heikki 8.4k
0
Votes
1
Reply
207
Views
C: What does it mean if a gene is not found in an assembly?
11 months ago
5heikki 8.4k
0
Votes
2
Replies
207
Views
C: What does it mean if a gene is not found in an assembly?
11 months ago
5heikki 8.4k
0
Votes
1
Reply
207
Views
C: What does it mean if a gene is not found in an assembly?
11 months ago
5heikki 8.4k
0
Votes
1
Reply
207
Views
C: What does it mean if a gene is not found in an assembly?
11 months ago
5heikki 8.4k
0
Votes
0
Replies
231
Views
A: FastQC results interpretation
11 months ago
5heikki 8.4k
2
Votes
0
Replies
2.0k
Views
C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
12 months ago
5heikki 8.4k
1
Vote
5
Replies
213
Views
What's going on with the NCBI ftp?
NCBI
12 months ago
5heikki 8.4k
0
Votes
1
Reply
2.0k
Views
C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
12 months ago
5heikki 8.4k
0
Votes
1
Reply
274
Views
C: Include STOP codon in getorf output
12 months ago
5heikki 8.4k
0
Votes
0
Replies
213
Views
C: What's going on with the NCBI ftp?
12 months ago
5heikki 8.4k
0
Votes
1
Reply
213
Views
C: What's going on with the NCBI ftp?
12 months ago
5heikki 8.4k
0
Votes
0
Replies
213
Views
C: Computer science grad student looking for advice/suggestions for master's thesis
12 months ago
5heikki 8.4k
0
Votes
1
Reply
390
Views
C: How to get a half correlation matrix?
12 months ago
5heikki 8.4k
0
Votes
1
Reply
208
Views
C: centos and bowtie2
12 months ago
5heikki 8.4k
0
Votes
0
Replies
475
Views
C: Can we consider Bioinformatics as a engineering discipline?
12 months ago
5heikki 8.4k
0
Votes
1
Reply
138
Views
C: Retrieving several bacteria CDS
12 months ago
5heikki 8.4k
1
Vote
1
Reply
138
Views
C: Retrieving several bacteria CDS
12 months ago
5heikki 8.4k
0
Votes
1
Reply
208
Views
A: centos and bowtie2
12 months ago
5heikki 8.4k
1
Vote
1
Reply
356
Views
C: Binning Tools for Long Reads/Contigs
13 months ago
5heikki 8.4k
0
Votes
1
Reply
356
Views
C: Binning Tools for Long Reads/Contigs
13 months ago
5heikki 8.4k
0
Votes
1
Reply
356
Views
C: Binning Tools for Long Reads/Contigs
13 months ago
5heikki 8.4k
1
Vote
0
Replies
172
Views
C: Blasting against all assemblies on NCBI without downloading the genomes
13 months ago
5heikki 8.4k
0
Votes
0
Replies
332
Views
C: Are parasites good as model organisms?
13 months ago
5heikki 8.4k
0
Votes
1
Reply
332
Views
C: Are parasites finally good for something?
13 months ago
5heikki 8.4k
0
Votes
1
Reply
356
Views
C: Binning Tools for Long Reads/Contigs
13 months ago
5heikki 8.4k
2
Votes
1
Reply
220
Views
A: How to rename duplicate fasta headers after the first underscore '_'?
13 months ago
5heikki 8.4k
1
Vote
0
Replies
378
Views
A: How to create a tab delimited file?
13 months ago
5heikki 8.4k
0
Votes
0
Replies
150
Views
C: Cross assembly of metagenomics
13 months ago
5heikki 8.4k
0
Votes
0
Replies
406
Views
C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
13 months ago
5heikki 8.4k
3
Votes
1
Reply
247
Views
A: How do I get a single nucleotide from my BLAST alignment?
13 months ago
5heikki 8.4k
0
Votes
0
Replies
247
Views
C: How do I get a single nucleotide from my BLAST alignment?
13 months ago
5heikki 8.4k
0
Votes
2
Replies
406
Views
C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
13 months ago
5heikki 8.4k
0
Votes
1
Reply
247
Views
C: How do I get a single nucleotide from my BLAST alignment?
13 months ago
5heikki 8.4k
0
Votes
1
Reply
406
Views
C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
13 months ago
5heikki 8.4k
0
Votes
1
Reply
406
Views
C: How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits
13 months ago
5heikki 8.4k
1
Vote
0
Replies
206
Views
C: Roary MSG: Got a sequence without letters. Could not guess alphabet
13 months ago
5heikki 8.4k
1
Vote
1
Reply
231
Views
C: Local Blast Error
13 months ago
5heikki 8.4k
0
Votes
1
Reply
239
Views
C: BLAST Database error: No GIs were found in BLAST database
13 months ago
5heikki 8.4k
2
Votes
0
Replies
201
Views
A: Shell script to reverse complement DNA, but with a twist (certain bases with a l
13 months ago
5heikki 8.4k
0
Votes
0
Replies
310
Views
C: Only one hit per query on blastn?
13 months ago
5heikki 8.4k
1
Vote
0
Replies
1.1k
Views
A: Survey: What colour theme do you use in your terminal?
13 months ago
5heikki 8.4k
2
Votes
1
Reply
16k
Views
C: BLAST, setting maximum number of hits
5.1 years ago
5heikki 8.4k • updated 13 months ago
RamRS 21k
6
Votes
1
Reply
16k
Views
A: BLAST, setting maximum number of hits
5.1 years ago
5heikki 8.4k • updated 13 months ago
RamRS 21k
0
Votes
1
Reply
216
Views
A: MS level RESEARCH IDEA
13 months ago
5heikki 8.4k
1
Vote
0
Replies
214
Views
C: Is there a way to segregate Plasmid contigs from Iontorrent WGS data?
13 months ago
5heikki 8.4k
1
Vote
1
Reply
214
Views
A: Is there a way to segregate Plasmid contigs from Iontorrent WGS data?
13 months ago
5heikki 8.4k
0
Votes
0
Replies
389
Views
C: Linearize fasta files
14 months ago
5heikki 8.4k
1
Vote
1
Reply
240
Views
C: 16S rRNA extraction of assembled genome bins
14 months ago
5heikki 8.4k
0
Votes
0
Replies
227
Views
C: Software to extract run information from FASTQ headers?
14 months ago
5heikki 8.4k
0
Votes
1
Reply
227
Views
C: Software to extract run information from FASTQ headers?
14 months ago
5heikki 8.4k
1
Vote
1
Reply
360
Views
C: How to extract the last 1000 nt from a group of sequences in a FASTA file?
14 months ago
5heikki 8.4k
1
Vote
1
Reply
360
Views
A: How to extract the last 1000 nt from a group of sequences in a FASTA file?
14 months ago
5heikki 8.4k
0
Votes
0
Replies
360
Views
A: Reduce number of reads from 100M to 50M in the sample from the existing RNA-Seq
14 months ago
5heikki 8.4k
0
Votes
0
Replies
195
Views
A: Metagenomics raw data to develop pipeline
14 months ago
5heikki 8.4k
0
Votes
0
Replies
152
Views
C: MEGAN - no reads found
14 months ago
5heikki 8.4k
0
Votes
0
Replies
253
Views
C: Senior Software Engineer
14 months ago
5heikki 8.4k
1
Vote
0
Replies
270
Views
A: How to predict complementary nucleotide sequence?
14 months ago
5heikki 8.4k
0
Votes
0
Replies
300
Views
C: Sorting out CD HiT output
14 months ago
5heikki 8.4k
0
Votes
0
Replies
274
Views
C: Include STOP codon in getorf output
14 months ago
5heikki 8.4k
0
Votes
0
Replies
274
Views
C: Include STOP codon in getorf output
14 months ago
5heikki 8.4k
0
Votes
0
Replies
274
Views
C: Include STOP codon in getorf output
14 months ago
5heikki 8.4k
0
Votes
2
Replies
300
Views
C: Sorting out CD HiT output
14 months ago
5heikki 8.4k
2
Votes
1
Reply
276
Views
A: How To Rename FASTA Headers
14 months ago
5heikki 8.4k
0
Votes
0
Replies
300
Views
A: Sorting out CD HiT output
14 months ago
5heikki 8.4k
1
Vote
1
Reply
255
Views
C: How to write a code in Linux to manipulate a large file with grep/awk
14 months ago
5heikki 8.4k
3
Votes
1
Reply
293
Views
C: Bowtie2 mapped just 50% of the reads
14 months ago
5heikki 8.4k
0
Votes
0
Replies
281
Views
C: Memory-driven computing accelerates genomic data processing
14 months ago
5heikki 8.4k
1
Vote
0
Replies
279
Views
C: Metagenomics best reference DB
14 months ago
5heikki 8.4k
0
Votes
0
Replies
281
Views
C: Memory-driven computing accelerates genomic data processing
14 months ago
5heikki 8.4k
1
Vote
0
Replies
279
Views
C: Metagenomics best reference DB
14 months ago
5heikki 8.4k
1
Vote
1
Reply
279
Views
C: Metagenomics best reference DB
14 months ago
5heikki 8.4k
2
Votes
2
Replies
279
Views
C: Metagenomics best reference DB
14 months ago
5heikki 8.4k
0
Votes
2
Replies
281
Views
C: Memory-driven computing accelerates genomic data processing
14 months ago
5heikki 8.4k
1
Vote
8
Replies
281
Views
Memory-driven computing accelerates genomic data processing
HPC Forum
14 months ago
5heikki 8.4k
0
Votes
0
Replies
318
Views
C: for loop over bwa aln
14 months ago
5heikki 8.4k
1
Vote
1
Reply
257
Views
A: blast against metagenome shotgun data - not getting the hits expected
15 months ago
5heikki 8.4k
0
Votes
0
Replies
342
Views
A: Career related query
15 months ago
5heikki 8.4k
0
Votes
1
Reply
326
Views
C: How can Investigate if a Viral genome is circular or linear? And if it is single
16 months ago
5heikki 8.4k
3
Votes
1
Reply
326
Views
A: How can Investigate if a Viral genome is circular or linear? And if it is single
16 months ago
5heikki 8.4k
0
Votes
0
Replies
229
Views
C: How do we call this phenomenon in evolution?
16 months ago
5heikki 8.4k
5
Votes
4
Replies
38k
Views
C: Download All The Bacterial Genomes From Ncbi
4.1 years ago
5heikki 8.4k • updated 16 months ago
RamRS 21k
2
Votes
1
Reply
984
Views
C: Binning of reads vs. binning of contigs in metagenomics
16 months ago
5heikki 8.4k
2
Votes
1
Reply
984
Views
C: Binning of reads vs. binning of contigs in metagenomics
16 months ago
5heikki 8.4k
0
Votes
0
Replies
242
Views
C: Don't understand the assignment - Artemis
17 months ago
5heikki 8.4k
1
Vote
0
Replies
336
Views
C: standalone blast output to excel
17 months ago
5heikki 8.4k
1
Vote
1
Reply
221
Views
A: Is there a database of phylogenetic information?
17 months ago
5heikki 8.4k
0
Votes
0
Replies
1.8k
Views
C: Misunderstood parameter of NCBI BLAST
18 months ago
5heikki 8.4k
3
Votes
1
Reply
525
Views
C: -max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
18 months ago
5heikki 8.4k
4
Votes
3
Replies
525
Views
-max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
software error blast News
18 months ago
5heikki 8.4k • updated 18 months ago
Devon Ryan 90k
0
Votes
0
Replies
795
Views
C: Workstation : More RAM or Faster RAM
18 months ago
5heikki 8.4k
0
Votes
1
Reply
612
Views
C: Missing sequences in local NT database
18 months ago
5heikki 8.4k
1
Vote
0
Replies
305
Views
C: primers for whole metagenome
18 months ago
5heikki 8.4k
1
Vote
0
Replies
305
Views
C: primers for whole metagenome
18 months ago
5heikki 8.4k
1
Vote
2
Replies
612
Views
C: Missing sequences in local NT database
18 months ago
5heikki 8.4k
0
Votes
2
Replies
612
Views
C: Missing sequences in local NT database
18 months ago
5heikki 8.4k
0
Votes
2
Replies
612
Views
C: Missing sequences in local NT database
18 months ago
5heikki 8.4k
Powered by the version 2.1