Khader Shameer ♦ 18k
Role: Moderator
Status: New
Handle: @Khader Shameer87
Reputation: 17550
Email: s*********@gmail.com
Joined: 7 months ago
Twitter: kshameer
Google Scholar: XSh3WiAAAAAJ
Last seen: 8 months ago
Location: Manhattan, NY

Currently: 
Director of Bioinformatics, Data Science and Precision Medicine at Philips Healthcare. 

Previously:
Biomedical & Healthcare data scientist at The Dudley Laboratory and Harris Center for Precision Wellness at the Mount Sinai Health System, NY. Also affiliated with the Department of Genetics and Genomics Sciences, and Icahn Institute for Genomics and Multiscale Biology and Icahn School of Medicine of Medicine at the Mount Sinai


Staff scientist in Personal genomics and Genomic Medicine at Mayo Clinic; Lead bioinformatics and computational genomics of MI-GENES trial (See ClinicalTrials.gov link:NCT01936675) Post-doc leading bioinformatics and genomic data analytics, big data management and research projects for electronic Medical Records and Genomics (eMERGE) and cardiovascular genomics at Mayo Clinic; PhD in Computational Biology / Biomedical Informatics from National Centre for Biological Sciences - Tata Institute of Fundamental Research & Indian Institute of Science. Graduate student at The Computational Biology Group, NCBS-TIFR.

I developed/co-developed/lead the development of the following tools and databases during my graduate school: 

  • Harmony - Protein structure validation server 
  • PeptideMine - Identification and analyses of peptides from local interactomes
  • FASSM - Function association using sequence-specific motifs 
  • SEQ2GO: Function annotation of hypothetical proteins using sequence based filtering and domain composition of intermediate homologs.
  • PURE: Prediction of Unassigned REgions in proteins 

 

Comment: C: R Wrapper For The Genecodis Api?
0 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Heritability Database
3 Votes | 3 Replies
8.1 years ago
Khader Shameer
18k
Answer: A: Good Gwas Papers / Resources
35 Votes | 1 Reply
9.5 years ago
Khader Shameer
18k
Answer: A: How To Use Go::Termfinder
7 Votes | 1 Reply
9.5 years ago
Khader Shameer
18k
Comment: C: How To Use Go::Termfinder
0 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Answer: A: Clustalw In Php
2 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Answer: A: Ultra-Conservation In Genome Comparisons
3 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Comment: C: Invariant Points
2 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Answer: A: Searching Ncbi'S Short Read Archive
4 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Comment: C: Calculating Tissue-Specificity From Affymetrix
0 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Answer: A: Calculating Tissue-Specificity From Affymetrix
3 Votes | 3 Replies
9.5 years ago
Khader Shameer
18k
Comment: C: Calculating Tissue-Specificity From Affymetrix
0 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Answer: A: Predicting Phenotype From Snp Data. Help!
1 Vote | 2 Replies
9.5 years ago
Khader Shameer
18k
Answer: A: Snps, Heterozygous Snps And Ld Info For Genes
2 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Answer: A: What Is Epitope Mapping?
2 Votes | 0 Replies
9.5 years ago
Khader Shameer
18k
Comment: C: Integrating A Visualizer With Your Java Codes
0 Votes | 0 Replies
9.6 years ago
Khader Shameer
18k
Answer: A: Decipher Integration
2 Votes | 0 Replies
9.6 years ago
Khader Shameer
18k
Answer: A: Levels Of Gene Homologous-Ness?
13 Votes | 0 Replies
9.6 years ago
Khader Shameer
18k
Answer: A: Finding Go Terms For Viral Annotated Genome
0 Votes | 0 Replies
9.6 years ago
Khader Shameer
18k
Answer: A: Jmol, Java Help Needed~
1 Vote | 2 Replies
9.6 years ago
Khader Shameer
18k
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