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1.1k
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Answer: Answer: Download whole 1000 genome phase 3 for LD clumping
3.0 years ago by Vivek ★ 2.7k
1
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0
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1.7k
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Matching files by chromosome during wdl scatter gather
wdl scatter
4.0 years ago by Vivek ★ 2.7k
2
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0
replies
945
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Answer: A: concordance metrics for exome trio analysis
4.2 years ago by Vivek ★ 2.7k
0
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0
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1.5k
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Comment: C: Imputing specific SNPs using Beagle5.1
4.2 years ago by Vivek ★ 2.7k
1
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2
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1.5k
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Imputing specific SNPs using Beagle5.1
imputation beagle
4.2 years ago by Vivek ★ 2.7k
0
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0
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22k
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Comment: C: How Did You Learn Good Practice In Bioinformatics/Computational Biology?
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.7k
4
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0
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2.6k
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Answer: A: Identify overlapping coordinates
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.7k
0
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0
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8.0k
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Comment: C: GATK-Depth of Coverage - Issue with per gene coverage
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.7k
5
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2
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16k
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Answer: A: How to efficiently remove a list of reads from BAM file?
updated 4.3 years ago by 43k • written 8.3 years ago by ★ 2.7k
0
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1
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2.1k
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Answer: A: Multiple Exon Start and End sites in UCSC Exons table
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 2.7k
0
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1
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4.4k
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Answer: A: comparing vcf files of disease and normal samples
updated 4.4 years ago by 43k • written 9.8 years ago by ★ 2.7k
0
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0
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3.9k
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Answer: A: Annovar and CADD Annotation
updated 4.5 years ago by 43k • written 8.7 years ago by ★ 2.7k
2
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1
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3.7k
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Answer: A: How to find de novo mutation in trio sequencing data in perl or python script?
updated 4.5 years ago by 43k • written 9.6 years ago by ★ 2.7k
2
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0
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13k
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Answer: A: Perl script running slow with big files
updated 4.5 years ago by 43k • written 9.8 years ago by ★ 2.7k
3
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2
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6.3k
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Comment: C: How to interpret and extract from a Vcf file Genotype informations as values
updated 4.5 years ago by 43k • written 9.9 years ago by ★ 2.7k
59
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3
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66k
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Answer: A: VCF files: Change Chromosome Notation
updated 4.8 years ago by 43k • written 10.0 years ago by ★ 2.7k
4
votes
4
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3.1k
views
Y Chromosome Haplotype Inference
haplotype
updated 5.1 years ago by ▴ 130 • written 10.6 years ago by ★ 2.7k
3
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0
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22k
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Answer: A: Remove Vcf Header Lines
updated 5.2 years ago by 11k • written 11.7 years ago by ★ 2.7k
0
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1
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1.8k
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Comment: C: Position error using write.plink
5.4 years ago by Vivek ★ 2.7k
1
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0
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2.3k
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Comment: C: GWAS data analysis strategy or pipeline
5.4 years ago by Vivek ★ 2.7k
1
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1
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2.3k
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Comment: C: GWAS data analysis strategy or pipeline
5.4 years ago by Vivek ★ 2.7k
3
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1
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2.3k
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Answer: A: GWAS data analysis strategy or pipeline
5.4 years ago by Vivek ★ 2.7k
0
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0
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1.4k
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Comment: C: Longitudinal Health Record Database Structure
5.5 years ago by Vivek ★ 2.7k
2
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5
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4.9k
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1000 Genomes and ESP Populations in Exome Aggregation Consortium Data
1000genomes ESP 1000 genomes ExAC EVS
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 2.7k
1
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0
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1.4k
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Comment: C: vcf file processing
5.9 years ago by Vivek ★ 2.7k
0
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1
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1.4k
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Comment: C: vcf file processing
5.9 years ago by Vivek ★ 2.7k
1
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1
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3.0k
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Answer: A: How to generate text file having SNP list from bim file in plink?
6.2 years ago by Vivek ★ 2.7k
0
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0
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1.4k
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Answer: A: Individual chromosome SNP VCF
6.2 years ago by Vivek ★ 2.7k
0
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0
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4.7k
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Answer: A: Calculating ethnicity of a sample VCF
6.7 years ago by Vivek ★ 2.7k
1
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1
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3.9k
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Comment: C: retrieving from ExAC in VCF format
6.7 years ago by Vivek ★ 2.7k
2
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1
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1.8k
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Answer: A: Hardy Weinberg data from 1000 genomes project
6.7 years ago by Vivek ★ 2.7k
2
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1
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3.9k
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Comment: C: retrieving from ExAC in VCF format
6.7 years ago by Vivek ★ 2.7k
6
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2
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3.9k
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Answer: A: retrieving from ExAC in VCF format
6.7 years ago by Vivek ★ 2.7k
1
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1
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102k
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Comment: C: How to plot coverage and depth statistics of a bam file
6.7 years ago by Vivek ★ 2.7k
2
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1
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102k
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Comment: C: How to plot coverage and depth statistics of a bam file
6.7 years ago by Vivek ★ 2.7k
0
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1
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1.6k
views
Answer: A: Mapping ORFs to Chromosome locations
6.8 years ago by Vivek ★ 2.7k
1
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3
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102k
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Comment: C: How to plot coverage and depth statistics of a bam file
6.8 years ago by Vivek ★ 2.7k
1
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1
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102k
views
Comment: C: How to plot coverage and depth statistics of a bam file
6.8 years ago by Vivek ★ 2.7k
0
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1
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102k
views
Comment: C: How to plot coverage and depth statistics of a bam file
6.8 years ago by Vivek ★ 2.7k
0
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1
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102k
views
Comment: C: How to plot coverage and depth statistics of a bam file
6.8 years ago by Vivek ★ 2.7k
0
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1
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102k
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Comment: C: How to plot coverage and depth statistics of a bam file
6.8 years ago by Vivek ★ 2.7k
0
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0
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2.1k
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Comment: C: tips for checking variants in IGV
6.9 years ago by Vivek ★ 2.7k
2
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1
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2.1k
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Answer: A: tips for checking variants in IGV
6.9 years ago by Vivek ★ 2.7k
3
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0
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1.4k
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Answer: A: question regarding bioinformatics jobs in US
6.9 years ago by Vivek ★ 2.7k
1
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0
replies
2.4k
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Calculating minor allele concordance
concordance maf array exome impute
7.1 years ago by Vivek ★ 2.7k
0
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1
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1.3k
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Answer: A: Protein Change Annotation from Oncotator
7.2 years ago by Vivek ★ 2.7k
1
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1
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2.6k
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Answer: A: Question about GATK hardfiltering conditions
7.2 years ago by Vivek ★ 2.7k
2
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1
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3.1k
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Answer: A: Principal Component Analysis
7.2 years ago by Vivek ★ 2.7k
1
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0
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2.1k
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Answer: A: plot coverage for WES data
7.2 years ago by Vivek ★ 2.7k
0
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1
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4.8k
views
Comment: C: how to analyse gene expression using RNA-seq data
7.2 years ago by Vivek ★ 2.7k
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