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1000G Phase 3 GRCh38 liftover - EUR-nonFIN subset
1000Genomes
updated 10 months ago by 43k • written 3.0 years ago by ▴ 90
0
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0
replies
1.6k
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Comment: Comment: Negative heritability and filtering summary statistics
19 months ago by gokberk ▴ 90
0
votes
1
reply
924
views
Comment: Comment: How can get significant results from the GWAS summary statistics results
2.4 years ago by gokberk ▴ 90
2
votes
1
reply
1.3k
views
Allele coding in BGENIE GWAS output
gwas bgenie summary statistics
updated 2.4 years ago by ▴ 30 • written 3.7 years ago by ▴ 90
0
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0
replies
1.5k
views
Comment: Comment: Miropeats download issue
2.5 years ago by gokberk ▴ 90
0
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1
reply
1.5k
views
Comment: Comment: Miropeats download issue
2.5 years ago by gokberk ▴ 90
0
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1
reply
1.5k
views
Comment: Comment: Miropeats download issue
2.5 years ago by gokberk ▴ 90
3
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7
replies
1.5k
views
Miropeats download issue
miropeats
2.5 years ago by gokberk ▴ 90
0
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1
reply
1.5k
views
Comment: Comment: Miropeats download issue
2.5 years ago by gokberk ▴ 90
0
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0
replies
1.8k
views
Comment: Comment: Ensembl phylogenetic context
2.5 years ago by gokberk ▴ 90
0
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1
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1.8k
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Comment: Comment: Ensembl phylogenetic context
2.5 years ago by gokberk ▴ 90
0
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0
replies
1.8k
views
Comment: Comment: Ensembl phylogenetic context
2.6 years ago by gokberk ▴ 90
0
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1
reply
1.8k
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Comment: Comment: Ensembl phylogenetic context
2.6 years ago by gokberk ▴ 90
0
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0
replies
1.8k
views
Comment: Comment: Ensembl phylogenetic context
2.6 years ago by gokberk ▴ 90
5
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8
replies
1.8k
views
Ensembl phylogenetic context
alignment ensembl phylogeny
2.5 years ago by gokberk ▴ 90
0
votes
0
replies
505
views
Intersecting phyloP bed and per-base bed files
format bedtools bed
2.7 years ago by gokberk ▴ 90
0
votes
0
replies
467
views
"significantly different" heritability
statistics heritability
2.9 years ago by gokberk ▴ 90
0
votes
0
replies
600
views
MAF and LD matching SNP list
variants snpsnap control
3.0 years ago by gokberk ▴ 90
1
vote
1
reply
1.2k
views
Answer: Answer: 1000G Phase 3 GRCh38 liftover - EUR-nonFIN subset
3.0 years ago by gokberk ▴ 90
2
votes
2
replies
900
views
SNP count in a set of genomic regions
annotations SNPs 1000G
updated 3.0 years ago by 14k • written 3.0 years ago by ▴ 90
3
votes
3
replies
1.6k
views
Negative heritability and filtering summary statistics
ldsc partitioned heritability
19 months ago by gokberk ▴ 90
2
votes
1
reply
1.6k
views
Answer: Answer: Negative heritability and filtering summary statistics
3.0 years ago by gokberk ▴ 90
0
votes
0
replies
841
views
One-sided test with LDSC --h2 flag and custom annotations
heritability ldsc partitioned
3.0 years ago by gokberk ▴ 90
5
votes
4
replies
7.4k
views
Long-read alignment with Minimap2
minimap2 long-read DNA-seq
updated 4.1 years ago by 20 • written 4.9 years ago by ▴ 90
0
votes
1
reply
795
views
HiSAT2 edit distance option
rna-seq hisat2
updated 4.2 years ago by • 0 • written 4.9 years ago by ▴ 90
5
votes
4
replies
3.5k
views
Extracting uniquely mapped reads from bams
rna-seq hisat2
updated 4.7 years ago by 20 • written 4.9 years ago by ▴ 90
0
votes
0
replies
1.5k
views
Comment: C: Phylogenetic tree construction from small sized SNP data
4.8 years ago by gokberk ▴ 90
2
votes
2
replies
1.5k
views
Phylogenetic tree construction from small sized SNP data
phylogenetic tree SNP SNPhyl
updated 4.8 years ago by 8.3k • written 4.8 years ago by ▴ 90
0
votes
0
replies
1.2k
views
Comment: C: Missing variants in hg38 lift-over of 1000-genomes data
4.8 years ago by gokberk ▴ 90
2
votes
2
replies
1.2k
views
Missing variants in hg38 lift-over of 1000-genomes data
1000genomes vcf
4.8 years ago by gokberk ▴ 90
1
vote
0
replies
1.3k
views
Comment: C: Extracting super-population allele frequencies from 1000 genomes (phase 3) data
4.8 years ago by gokberk ▴ 90
4
votes
2
replies
1.3k
views
Extracting super-population allele frequencies from 1000 genomes (phase 3) data
vcf 1000genomes
4.8 years ago by gokberk ▴ 90
0
votes
1
reply
7.4k
views
Comment: C: Long-read alignment with Minimap2
4.9 years ago by gokberk ▴ 90
2
votes
0
replies
7.4k
views
Answer: A: Long-read alignment with Minimap2
4.9 years ago by gokberk ▴ 90
0
votes
1
reply
3.5k
views
Comment: C: Extracting uniquely mapped reads from bams
4.9 years ago by gokberk ▴ 90
3
votes
1
reply
852
views
Unexpected characters at consensus fasta generated by mpileup
samtools mpileup consensussequence
4.9 years ago by gokberk ▴ 90
0
votes
1
reply
2.2k
views
Comment: C: featureCounts - annotation file issue
4.9 years ago by gokberk ▴ 90
4
votes
3
replies
2.2k
views
featureCounts - annotation file issue
RNA-Seq
4.9 years ago by gokberk ▴ 90
0
votes
0
replies
1.7k
views
Comment: C: Subread alignment issue
5.0 years ago by gokberk ▴ 90
0
votes
4
replies
1.7k
views
Subread alignment issue
rna-seq
5.0 years ago by gokberk ▴ 90
0
votes
0
replies
1.2k
views
Comment: C: Generating count table
5.0 years ago by gokberk ▴ 90
6
votes
2
replies
1.2k
views
Generating count table
RNA-Seq
5.0 years ago by gokberk ▴ 90
2
votes
1
reply
2.3k
views
Annotation problem while using Rsubread
annotation gtf gff
5.0 years ago by gokberk ▴ 90
5
votes
4
replies
1.2k
views
Browsing mappings for multiple BAM files
RNA-Seq
updated 5.0 years ago by ▴ 40 • written 5.0 years ago by ▴ 90
0
votes
0
replies
1.2k
views
Comment: C: Browsing mappings for multiple BAM files
5.0 years ago by gokberk ▴ 90
0
votes
1
reply
2.0k
views
Comment: C: TopHat mapping error
5.0 years ago by gokberk ▴ 90
0
votes
0
replies
2.0k
views
Comment: C: TopHat mapping error
5.0 years ago by gokberk ▴ 90
0
votes
2
replies
2.0k
views
Comment: C: TopHat mapping error
5.0 years ago by gokberk ▴ 90
0
votes
1
reply
2.0k
views
Comment: C: TopHat mapping error
5.0 years ago by gokberk ▴ 90
0
votes
0
replies
2.0k
views
Comment: C: TopHat mapping error
5.1 years ago by gokberk ▴ 90
56 results • Page 1 of 2
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