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0
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0
replies
261
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TSS Enrichment error in Signac
Signac scRNA-ATAC ensdb
9 weeks ago by kousi31 ▴ 100
2
votes
1
reply
307
views
How to solve unloadNamespace(package) : namespace in R
R
updated 9 weeks ago by 43k • written 9 weeks ago by ▴ 100
1
vote
2
replies
247
views
How to use gsub inside mapply to assign names to Seurat objects
scATAC-seq seurat
updated 9 weeks ago by 43k • written 9 weeks ago by ▴ 100
1
vote
1
reply
247
views
Answer: Answer: How to use gsub inside mapply to assign names to Seurat objects
updated 9 weeks ago by 43k • written 9 weeks ago by ▴ 100
0
votes
2
replies
509
views
Comment: Comment: Iterate through Seurat object to add patient information
updated 12 weeks ago by 43k • written 12 weeks ago by ▴ 100
0
votes
1
reply
509
views
Comment: Comment: Iterate through Seurat object to add patient information
12 weeks ago by kousi31 ▴ 100
0
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2
replies
509
views
Comment: Comment: Iterate through Seurat object to add patient information
12 weeks ago by kousi31 ▴ 100
0
votes
7
replies
509
views
Iterate through Seurat object to add patient information
R Seurat
updated 12 weeks ago by 43k • written 12 weeks ago by ▴ 100
2
votes
1
reply
319
views
will the features.tsv file from 10X chromium be same for all donor individuals?
scRNA-seq chromium 10x single-cell
updated 12 weeks ago by 43k • written 3 months ago by ▴ 100
0
votes
1
reply
1.3k
views
cytoscape: Network Analyser error - Network interpretation null
software error cytoscape
updated 3.6 years ago by ▴ 50 • written 3.9 years ago by ▴ 100
4
votes
12
replies
5.3k
views
Salmon installation error
software error
updated 3.7 years ago by • 0 • written 5.0 years ago by ▴ 100
0
votes
1
reply
2.7k
views
Comment: C: How to make box plot for different gene types
3.7 years ago by kousi31 ▴ 100
0
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1
reply
2.7k
views
Comment: C: How to make box plot for different gene types
3.7 years ago by kousi31 ▴ 100
7
votes
4
replies
2.7k
views
How to make box plot for different gene types
R Box plot RNA-Seq
updated 2.2 years ago by 21k • written 3.7 years ago by ▴ 100
0
votes
2
replies
1.2k
views
Extracting features corresponding to low entropy regions from RNAfold output
RNAfold RNA secondary structure
updated 3.7 years ago by ▴ 230 • written 3.8 years ago by ▴ 100
0
votes
1
reply
5.8k
views
Comment: C: chromoMap- R package for Interactive visualization and Annotation of chromosomes
3.8 years ago by kousi31 ▴ 100
0
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1
reply
2.7k
views
Comment: A: ChromoMap Error in 1:nrow(temp.df) : argument of length 0
3.8 years ago by kousi31 ▴ 100
0
votes
3
replies
2.7k
views
ChromoMap Error in 1:nrow(temp.df) : argument of length 0
R chromoMap software error
3.8 years ago by kousi31 ▴ 100
2
votes
4
replies
1.3k
views
Specifying unequal replicates in deseq2 with htseq-count input
DEseq2 RNA-Seq DE analysis
3.8 years ago by kousi31 ▴ 100
0
votes
0
replies
1.3k
views
Comment: A: Specifying unequal replicates in deseq2 with htseq-count input
3.8 years ago by kousi31 ▴ 100
2
votes
1
reply
992
views
Enhanced volcano plot - Over-ride colouring scheme with custom key-value pairs for both log2FC and p value
enhanced volcano plot software R deseq2
updated 3.8 years ago by 87k • written 3.8 years ago by ▴ 100
0
votes
1
reply
1.7k
views
Comment: C: Error while running CPAT
3.8 years ago by kousi31 ▴ 100
0
votes
1
reply
1.7k
views
Comment: C: Error while running CPAT
3.8 years ago by kousi31 ▴ 100
0
votes
0
replies
1.7k
views
Comment: C: Error while running CPAT
3.8 years ago by kousi31 ▴ 100
0
votes
2
replies
1.7k
views
Comment: C: Error while running CPAT
3.8 years ago by kousi31 ▴ 100
1
vote
8
replies
1.7k
views
Error while running CPAT
software error
3.8 years ago by kousi31 ▴ 100
0
votes
1
reply
1.9k
views
Comment: A: How to prepare ranked-gene list for statistical enrichment test in PANTHER datab
3.9 years ago by kousi31 ▴ 100
0
votes
3
replies
1.9k
views
How to prepare ranked-gene list for statistical enrichment test in PANTHER database
panther ranked-gene-list pathway-enrichment
3.9 years ago by kousi31 ▴ 100
1
vote
1
reply
5.0k
views
Comment: C: How to select multiple nodes with mouse - left click and drag
3.9 years ago by kousi31 ▴ 100
6
votes
3
replies
5.0k
views
How to select multiple nodes with mouse - left click and drag
cytoscape software
updated 7 weeks ago by • 0 • written 3.9 years ago by ▴ 100
3
votes
2
replies
1.2k
views
Merged vs. Ensembl GTF for htseq-count
RNA-Seq htseq-count
updated 3.9 years ago by ★ 4.0k • written 3.9 years ago by ▴ 100
2
votes
3
replies
1.7k
views
How to use output of PANTHER Enrichment Test as input to cytoscape
panther cytoscape
3.9 years ago by kousi31 ▴ 100
0
votes
1
reply
1.7k
views
Comment: A: How to use output of PANTHER Enrichment Test as input to cytoscape
3.9 years ago by kousi31 ▴ 100
0
votes
1
reply
1.6k
views
KEGG database for GSEA
GSEA kegg RNA-Seq enrichment-pathway analysis
3.9 years ago by kousi31 ▴ 100
0
votes
1
reply
2.4k
views
Comment: C: How to feed the sequence dictionary created with multifasta file into python fun
4.0 years ago by kousi31 ▴ 100
1
vote
3
replies
2.4k
views
How to feed the sequence dictionary created with multifasta file into python function
python multi-fasta function
updated 4.0 years ago by ▴ 600 • written 4.0 years ago by ▴ 100
0
votes
0
replies
611
views
Do anyone know how to interpret Graphclust ouput files?
Graphclust RNA secondary structure
4.5 years ago by kousi31 ▴ 100
0
votes
0
replies
1.6k
views
Comment: C: Installation error - RNAPLEX
4.5 years ago by kousi31 ▴ 100
1
vote
3
replies
1.6k
views
Installation error - RNAPLEX
software error RNAplex makefile
updated 4.5 years ago by 81k • written 4.5 years ago by ▴ 100
8
votes
13
replies
4.3k
views
8 follow
Doubt - installing LncTar software
software installation Lnctar perl
updated 10 months ago by • 0 • written 4.7 years ago by ▴ 100
1
vote
1
reply
2.3k
views
Comment: C: How to get multiple alignments from different species using lastz?
4.7 years ago by kousi31 ▴ 100
0
votes
2
replies
1.2k
views
Which axis to look for in PCA plot to understand the sample clustering
PCA RNA-Seq QC clustering
updated 4.7 years ago by 14k • written 4.7 years ago by ▴ 100
0
votes
0
replies
4.3k
views
Comment: C: Doubt - installing LncTar software
4.7 years ago by kousi31 ▴ 100
0
votes
1
reply
4.3k
views
Comment: C: Doubt - installing LncTar software
4.7 years ago by kousi31 ▴ 100
0
votes
0
replies
1.2k
views
Comment: C: How to obtain multiple sequence alignments of genomes of selected vertebrate spe
4.7 years ago by kousi31 ▴ 100
0
votes
1
reply
687
views
FIRE installation error
software error
4.7 years ago by kousi31 ▴ 100
0
votes
0
replies
1.2k
views
Comment: C: How to obtain multiple sequence alignments of genomes of selected vertebrate spe
4.7 years ago by kousi31 ▴ 100
0
votes
3
replies
1.2k
views
How to obtain multiple sequence alignments of genomes of selected vertebrate species?
multiple-sequence-alignment
updated 11 months ago by 43k • written 4.7 years ago by ▴ 100
0
votes
0
replies
3.7k
views
Comment: C: How to quantify gene expression when stringtie considers two adjacent genes as s
4.7 years ago by kousi31 ▴ 100
0
votes
1
reply
3.7k
views
Comment: C: How to quantify gene expression when stringtie considers two adjacent genes as s
4.7 years ago by kousi31 ▴ 100
81 results • Page 1 of 2
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