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0
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4
replies
1.7k
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how to merge peaks when finished IDR consistency test in ATAC-seq data?
ATAC-seq IDR
updated 8 months ago by 43k • written 3.3 years ago by ▴ 40
0
votes
2
replies
3.5k
views
bedGraphToBigWig: error while loading shared libraries: libpng12.so.0: cannot open shared object file: No such file or directory
bigwig software error bedgraph
updated 3.3 years ago by 161k • written 3.3 years ago by ▴ 40
0
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1
reply
1.7k
views
Comment: A: how to merge peaks when finished IDR consistency test in ATAC-seq data?
3.3 years ago by hsu ▴ 40
3
votes
3
replies
952
views
SCnorm -plotCountDepth error
RNA-Seq
updated 3.4 years ago by 20 • written 5.7 years ago by ▴ 40
0
votes
4
replies
4.0k
views
what to do after pseudotime analysis by Monocle?
monocle pseudotime
updated 4.2 years ago by ★ 1.2k • written 4.7 years ago by ▴ 40
0
votes
0
replies
1.2k
views
How to remove grey module when plot cluster dendrogram of WGCNA?
WGCNA
4.3 years ago by hsu ▴ 40
0
votes
1
reply
2.8k
views
Comment: A: fwrite.c:10:49: fatal error: zlib.h: No such file or directory #include <zlib.h
4.3 years ago by hsu ▴ 40
0
votes
5
replies
2.8k
views
fwrite.c:10:49: fatal error: zlib.h: No such file or directory #include <zlib.h> // for compression to .gz
RStudio-server
4.3 years ago by hsu ▴ 40
0
votes
1
reply
694
views
Transcription Factor motif Enrichment analysis of yeast
yeast MET transcription TF
4.3 years ago by hsu ▴ 40
0
votes
0
replies
844
views
How to apply SCENIC to other species for gene network regulatory anlysis?
scRNA-seq SCENIC GNR
4.3 years ago by hsu ▴ 40
1
vote
5
replies
2.3k
views
SummarizedExperiment-- Error in all_dims[, 1L] : incorrect number of dimensions
SummarizedExperiment R
updated 4.4 years ago by ▴ 10 • written 4.4 years ago by ▴ 40
0
votes
3
replies
5.0k
views
DESeq2 error :Error in cleanContrast
DESeq2
updated 4.4 years ago by ★ 16k • written 4.4 years ago by ▴ 40
0
votes
1
reply
2.3k
views
Answer: A: SummarizedExperiment-- Error in all_dims[, 1L] : incorrect number of dimensions
4.4 years ago by hsu ▴ 40
0
votes
1
reply
560
views
Where to find normal human dermis bulk RNA-seq data?
dermis RNA-seq
updated 4.4 years ago by 81k • written 4.4 years ago by ▴ 40
0
votes
1
reply
4.7k
views
Comment: C: A error when using zinbwave:'package:stats' may not be available when loadingErr
4.7 years ago by hsu ▴ 40
0
votes
3
replies
4.7k
views
A error when using zinbwave:'package:stats' may not be available when loadingError in serialize(data, node$con) : error writing to connection
deseq2 zinbwave scRNA-seq
updated 4.7 years ago by 27k • written 4.7 years ago by ▴ 40
0
votes
1
reply
4.0k
views
Comment: C: what to do after pseudotime analysis by Monocle?
4.7 years ago by hsu ▴ 40
0
votes
1
reply
2.4k
views
Comment: C: How to remove cell cycle effct when analysing scRNA-seq data?
4.7 years ago by hsu ▴ 40
2
votes
3
replies
2.4k
views
How to remove cell cycle effct when analysing scRNA-seq data?
RNA-Seq cell-cycle single cell
updated 4.8 years ago by ★ 4.0k • written 4.8 years ago by ▴ 40
0
votes
0
replies
1.2k
views
Comment: C: where to find budding yeast gene annotation information when analysis scRNA-seq
4.8 years ago by hsu ▴ 40
0
votes
4
replies
1.2k
views
where to find budding yeast gene annotation information when analysis scRNA-seq data
gene-annotation RNA-Seq single-cell yeast
updated 13 months ago by 43k • written 4.8 years ago by ▴ 40
0
votes
1
reply
1.2k
views
Answer: A: where to find budding yeast gene annotation information when analysis scRNA-seq
4.8 years ago by hsu ▴ 40
9
votes
10
replies
3.2k
views
How to transfer big sequencing data abroad on internet?
transfer database sequence
4.8 years ago by hsu ▴ 40
0
votes
0
replies
3.2k
views
Comment: A: How to transfer big sequencing data abroad on internet?
4.8 years ago by hsu ▴ 40
0
votes
1
reply
3.2k
views
Comment: C: How to transfer big sequencing data abroad on internet?
4.8 years ago by hsu ▴ 40
2
votes
2
replies
1.4k
views
How to remove the 5' sepecific sequence of fastq file
remove fastq cutadapt
4.9 years ago by hsu ▴ 40
7
votes
4
replies
5.8k
views
How to extract reads which contain specific sequence from fastq file
fastq reads extract
updated 4.9 years ago by 47k • written 4.9 years ago by ▴ 40
0
votes
0
replies
986
views
Comment: C: how to align sequences with extra bases in 5'
4.9 years ago by hsu ▴ 40
0
votes
0
replies
986
views
Comment: C: how to align sequences with extra bases in 5'
4.9 years ago by hsu ▴ 40
0
votes
6
replies
986
views
how to align sequences with extra bases in 5'
alignment UMI
4.9 years ago by hsu ▴ 40
0
votes
1
reply
986
views
Comment: C: how to align sequences with extra bases in 5'
4.9 years ago by hsu ▴ 40
0
votes
0
replies
986
views
Comment: C: how to align sequences with extra bases in 5'
4.9 years ago by hsu ▴ 40
1
vote
1
reply
2.4k
views
how to analyze scRNA-seq data which contain ERCC spike-in reads
RNA-Seq ERCC spike-in
4.9 years ago by hsu ▴ 40
4
votes
2
replies
12k
views
how to add p-value in R boxplot
boxplot R p-value
updated 5.5 years ago by 104k • written 5.5 years ago by ▴ 40
0
votes
1
reply
2.2k
views
monocle how to identify branches
RNA-Seq pseudotime monocle
updated 10 months ago by 43k • written 5.5 years ago by ▴ 40
2
votes
1
reply
4.6k
views
Error in pheatmap: formal argument "scale" matched by multiple actual arguments
R pheatmap
updated 5.6 years ago by 11k • written 5.6 years ago by ▴ 40
0
votes
0
replies
2.6k
views
monocle clustering cells without marker genes error
R RNA-Seq monocle
updated 10 months ago by 43k • written 5.7 years ago by ▴ 40
0
votes
1
reply
4.3k
views
Answer: A: Seurat -FindVariableGenes problem
5.7 years ago by hsu ▴ 40
0
votes
4
replies
4.3k
views
Seurat -FindVariableGenes problem
software error Seurat FindVariableGenes
5.7 years ago by hsu ▴ 40
2
votes
3
replies
1.8k
views
scimpute problem: error in read table
rna-seq
updated 5.7 years ago by 43k • written 5.7 years ago by ▴ 40
0
votes
1
reply
1.8k
views
Comment: C: scimpute problem: error in read table
5.7 years ago by hsu ▴ 40
0
votes
1
reply
952
views
Comment: C: SCnorm -plotCountDepth error
5.7 years ago by hsu ▴ 40
2
votes
4
replies
2.1k
views
perl compilation errors
Assembly
updated 5.8 years ago by 54k • written 5.8 years ago by ▴ 40
0
votes
1
reply
2.1k
views
Comment: C: featureCounts problem annotation
5.8 years ago by hsu ▴ 40
0
votes
1
reply
2.1k
views
Comment: C: featureCounts problem annotation
5.8 years ago by hsu ▴ 40
0
votes
1
reply
2.1k
views
Comment: C: featureCounts problem annotation
updated 5.8 years ago by 141k • written 5.8 years ago by ▴ 40
2
votes
8
replies
2.1k
views
featureCounts problem annotation
genome
updated 5.8 years ago by ★ 3.8k • written 5.8 years ago by ▴ 40
0
votes
1
reply
6.0k
views
Comment: C: Hisat2 build index error
5.8 years ago by hsu ▴ 40
0
votes
1
reply
6.0k
views
Comment: C: Hisat2 build index error
5.8 years ago by hsu ▴ 40
0
votes
1
reply
6.0k
views
Comment: C: Hisat2 build index error
5.8 years ago by hsu ▴ 40
54 results • Page 1 of 2
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