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358
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Comment: Comment: Rename multiple fastq.gz files
3 days ago by shenwei356 8.4k
0
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0
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553
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
18 days ago by shenwei356 8.4k
1
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2
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553
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Answer: Answer: Removing adapter/primer sequence from reads while keeping flanking regions
18 days ago by shenwei356 8.4k
0
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0
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361
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Comment: Comment: Parsing fasta file by coordinates
25 days ago by shenwei356 8.4k
1
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1
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305
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Comment: Comment: Seqkit Replace
5 weeks ago by shenwei356 8.4k
2
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1
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305
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Answer: Answer: Seqkit Replace
5 weeks ago by shenwei356 8.4k
2
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1
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546
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Comment: Comment: Max lenght reads from fastq
6 weeks ago by shenwei356 8.4k
0
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0
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187
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Comment: Comment: Conda appears different than yesterday
11 weeks ago by shenwei356 8.4k
0
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0
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509
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Comment: Comment: Blastn for all bacteria genomes; create the db
11 weeks ago by shenwei356 8.4k
0
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1
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509
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Answer: Answer: Blastn for all bacteria genomes; create the db
11 weeks ago by shenwei356 8.4k
7
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5
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4.7k
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How to get consensus FASTA sequence from GFA assembly graph?
gfa consensus
updated 3 months ago by ▴ 40 • written 5.3 years ago by 8.4k
0
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0
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185
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Comment: Comment: Calculating percentage of reads mapped to a reference genome
3 months ago by shenwei356 8.4k
3
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1
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725
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Answer: Answer: Renaming fasta files with their headers
4 months ago by shenwei356 8.4k
0
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1
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455
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Comment: Comment: Species coverage in the NCBI protein NR database ?
4 months ago by shenwei356 8.4k
0
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0
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455
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Comment: Comment: Species coverage in the NCBI protein NR database ?
4 months ago by shenwei356 8.4k
5
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0
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555
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Answer: Answer: how to sort fasta file accroding to header
5 months ago by shenwei356 8.4k
0
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1
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1.8k
views
Comment: Comment: How to limit fasta header to 40 characters?
7 months ago by shenwei356 8.4k
13
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6
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5.1k
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Tool: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
CSV Golang TSV
8 months ago by shenwei356 8.4k
1
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0
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5.1k
views
Answer: Answer: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
8 months ago by shenwei356 8.4k
0
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0
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25k
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Comment: Comment: searching reads with a certain sequence in fastq file
9 months ago by shenwei356 8.4k
0
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1
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526
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Answer: Answer: Question about sequence alignment
9 months ago by shenwei356 8.4k
3
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0
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806
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Answer: Answer: How to extract sequences from multiple fastq files based on a certain sequence
9 months ago by shenwei356 8.4k
2
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0
replies
978
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Answer: Answer: Bash solution to replace part of FASTA headers witch contain matching values in
10 months ago by shenwei356 8.4k
1
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0
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1.8k
views
Answer: Answer: Getting sequences from fastq file using Grep command
10 months ago by shenwei356 8.4k
2
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0
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676
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Answer: Answer: how to sort unique seq from fasta files
10 months ago by shenwei356 8.4k
0
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1
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14k
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Comment: Comment: How to concatenate multiple fasta file
10 months ago by shenwei356 8.4k
2
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1
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1.1k
views
Comment: Comment: how to use nohup with parallel
10 months ago by shenwei356 8.4k
0
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1
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918
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Answer: Answer: Add a genome to a kraken library
11 months ago by shenwei356 8.4k
2
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0
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484
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Answer: Answer: Randomly reduce size of reads but preserving the distribution
12 months ago by shenwei356 8.4k
4
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1
reply
1.6k
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Answer: Answer: Compare two very close genomes (.fasta)
12 months ago by shenwei356 8.4k
1
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1
reply
646
views
Answer: Answer: How to identify Gap location
12 months ago by shenwei356 8.4k
2
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0
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414
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Answer: Answer: I need a tool that allows me to see a whole genome and point out previously anno
12 months ago by shenwei356 8.4k
2
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0
replies
999
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Answer: Answer: how to rename or time bunch of file names in fasta file
12 months ago by shenwei356 8.4k
0
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1
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501
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Answer: Answer: genome annotation [sstart] [send] - how to get protein sequence from gene
12 months ago by shenwei356 8.4k
1
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0
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2.0k
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Comment: Comment: Editting fasta headers
12 months ago by shenwei356 8.4k
1
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0
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2.0k
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Comment: Comment: Editting fasta headers
12 months ago by shenwei356 8.4k
2
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0
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1.4k
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Comment: Comment: split fasta file to train deep learning model
12 months ago by shenwei356 8.4k
3
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1
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1.4k
views
Comment: Comment: split fasta file to train deep learning model
13 months ago by shenwei356 8.4k
6
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0
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1.5k
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Answer: Answer: how to edit fasta header
13 months ago by shenwei356 8.4k
0
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0
replies
1.2k
views
Answer: Answer: command line - how to change name of multiple files at the same time
14 months ago by shenwei356 8.4k
0
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0
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1.9k
views
Comment: Comment: batch renaming FASTQ files
14 months ago by shenwei356 8.4k
2
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0
replies
633
views
Comment: Comment: 30 bp sequence that does not show hit within a genome
15 months ago by shenwei356 8.4k
2
votes
0
replies
588
views
Answer: Answer: bash/awk code to comapre tables
16 months ago by shenwei356 8.4k
1
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0
replies
1.4k
views
Comment: Comment: retrieve amplicon sequences from fna file
16 months ago by shenwei356 8.4k
1
vote
1
reply
1.7k
views
Comment: Comment: How to determine the encoding method of quality score in a fastaq file?
16 months ago by shenwei356 8.4k
1
vote
1
reply
645
views
Answer: Answer: How to reduce RNA_from_genomic file to just gene name and sequence
18 months ago by shenwei356 8.4k
2
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0
replies
1.3k
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Answer: Answer: How to add column name to each cell using bash?
18 months ago by shenwei356 8.4k
3
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1
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2.2k
views
Answer: Answer: fasta extract using seqkit grep regex pattern
18 months ago by shenwei356 8.4k
0
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1
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1.8k
views
Comment: Comment: Renaming sequencing libraries
18 months ago by shenwei356 8.4k
1
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1
reply
1.8k
views
Comment: Comment: Renaming sequencing libraries
18 months ago by shenwei356 8.4k
760 results • Page 1 of 16
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