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Microbiome / metagenomics databases
microbiome database metagenomics
17 months ago by erwan.scaon ▴ 930
0
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1
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96k
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Comment: Comment: Number of mapped reads from BAM file
17 months ago by erwan.scaon ▴ 930
0
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0
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411
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Enterotypes - Get raw data from E. Le Chatelier et al., 2013
Enterotypes MGnify
updated 13 months ago by 43k • written 22 months ago by ▴ 930
2
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1
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1.4k
views
Answer: Answer: How to select rows in a column and add a zero to selected rows
2.3 years ago by erwan.scaon ▴ 930
2
votes
4
replies
5.4k
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blast culling_limit option behavior
blastn alignment culling_limit
updated 2.6 years ago by ▴ 20 • written 7.4 years ago by ▴ 930
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0
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859
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Comment: C: Extract all seqs bewteen two seqs ID in Fastq
3.8 years ago by erwan.scaon ▴ 930
0
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1
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859
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Comment: C: Extract all seqs bewteen two seqs ID in Fastq
3.8 years ago by erwan.scaon ▴ 930
0
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4
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859
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Extract all seqs bewteen two seqs ID in Fastq
fastq awk sed
updated 3.8 years ago by 161k • written 3.8 years ago by ▴ 930
2
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1
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1.9k
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Answer: A: Algorithm based differences between Mutect2 and Haplotypecaller?
4.7 years ago by erwan.scaon ▴ 930
1
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0
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11k
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Answer: A: Genome assembly statistical tools
4.7 years ago by erwan.scaon ▴ 930
0
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4
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2.4k
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Diffbind error : sequences from an unspecified genome; no seqlengths
Diffbind MACS2 GRanges MACS ChIP-Seq
updated 4.7 years ago by • 0 • written 6.1 years ago by ▴ 930
1
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0
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3.9k
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Answer: A: choose between normalization techniques for OTU counts
5.1 years ago by erwan.scaon ▴ 930
0
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1
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2.1k
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Answer: A: DESEQ2 size factors change when number of samples change in the design
5.4 years ago by erwan.scaon ▴ 930
0
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0
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897
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Find the closest Salmonella complete genome (starting with a NGS sample from a single Salmonella strain)
salmonella strainseeker snippy
5.4 years ago by erwan.scaon ▴ 930
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0
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3.0k
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Comment: C: strandness of paired-end data
5.5 years ago by erwan.scaon ▴ 930
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0
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2.8k
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Comment: C: edirect esearch : exclude given accessions
5.5 years ago by erwan.scaon ▴ 930
0
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0
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2.8k
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Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
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1
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2.8k
views
Answer: A: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
3
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20
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2.8k
views
edirect esearch : exclude given accessions
edirect esearch ncbi
5.6 years ago by erwan.scaon ▴ 930
0
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1
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2.8k
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Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
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1
reply
2.8k
views
Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
votes
1
reply
2.8k
views
Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
votes
1
reply
2.8k
views
Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
votes
1
reply
2.8k
views
Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
votes
1
reply
2.8k
views
Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
votes
0
replies
2.8k
views
Comment: C: edirect esearch : exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
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0
replies
2.8k
views
Comment: C: Edirect esearch exclude given accessions
5.6 years ago by erwan.scaon ▴ 930
0
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1
reply
96k
views
Comment: C: Number of mapped reads from BAM file
5.6 years ago by erwan.scaon ▴ 930
0
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0
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9.3k
views
Answer: A: Fasta file filtering
5.9 years ago by erwan.scaon ▴ 930
1
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0
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3.0k
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Comment: C: Parsing Blast output on linux/unix
5.9 years ago by erwan.scaon ▴ 930
0
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1
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7.7k
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Comment: C: Kallisto TPM values
5.9 years ago by erwan.scaon ▴ 930
0
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1
reply
1.8k
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Comment: C: Search only plasmids from NT database using local BLAST
5.9 years ago by erwan.scaon ▴ 930
1
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1
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1.8k
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Comment: C: Search only plasmids from NT database using local BLAST
5.9 years ago by erwan.scaon ▴ 930
2
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0
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2.5k
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Comment: C: Identifying CNVs from targeted amplicon sequencing
5.9 years ago by erwan.scaon ▴ 930
0
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1
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7.7k
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Comment: C: Kallisto TPM values
5.9 years ago by erwan.scaon ▴ 930
1
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1
reply
1.2k
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Comment: C: Please suggest your idea for variant calling analysis of many BAM files from who
6.0 years ago by erwan.scaon ▴ 930
0
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0
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5.7k
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Comment: A: STAR options for RNA Seq
6.0 years ago by erwan.scaon ▴ 930
0
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1
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2.8k
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Comment: C: How to make a custom gtf or gff3 file with a list containing transcript loci
6.0 years ago by erwan.scaon ▴ 930
0
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0
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2.2k
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Comment: C: extracting sequence from fast file
6.0 years ago by erwan.scaon ▴ 930
0
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0
replies
1.5k
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Comment: C: How to convert a LONG list of Genbank accession numbers for mRNA variants to a l
6.0 years ago by erwan.scaon ▴ 930
2
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0
replies
21k
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Comment: C: Is there a tool that sorts gtf files?
6.1 years ago by erwan.scaon ▴ 930
2
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1
reply
21k
views
Comment: C: Is there a tool that sorts gtf files?
6.1 years ago by erwan.scaon ▴ 930
6
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3
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21k
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Answer: A: Is there a tool that sorts gtf files?
6.1 years ago by erwan.scaon ▴ 930
1
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1
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4.0k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
6.1 years ago by erwan.scaon ▴ 930
0
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0
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4.0k
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Comment: C: ChIP-Seq samples : FASTQ quality control
6.1 years ago by erwan.scaon ▴ 930
0
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1
reply
4.0k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
6.1 years ago by erwan.scaon ▴ 930
0
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1
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4.0k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
6.1 years ago by erwan.scaon ▴ 930
11
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28
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4.0k
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ChIP-Seq samples : FASTQ quality control
ChIP-Seq QC
6.1 years ago by erwan.scaon ▴ 930
0
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1
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4.0k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
6.1 years ago by erwan.scaon ▴ 930
0
votes
1
reply
4.0k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
6.1 years ago by erwan.scaon ▴ 930
100 results • Page 1 of 2
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