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About
karthic • 100
Status:
New
Handle:
@karthic42122
Reputation:
100
Joined:
19 months ago
Last seen:
21 months ago
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0
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127
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Comment:
C: Highly similar bacterial genomes
21 months ago
karthic
• 100
0
Votes
2
Replies
127
Views
Highly similar bacterial genomes
genome
bacterial genomes
comparative study
21 months ago
karthic
• 100
0
Votes
0
Replies
468
Views
Comment:
C: Creating interaction network using cytoscape
2.1 years ago
karthic
• 100
0
Votes
1
Reply
216
Views
Comment:
C: What is Genome-sequencing?
2.1 years ago
karthic
• 100
0
Votes
1
Reply
311
Views
Comment:
C: target gene selection for miRNA
2.1 years ago
karthic
• 100
0
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0
Replies
316
Views
Comment:
C: num_threads with blastn in blast 2.6.0+
2.1 years ago
karthic
• 100
0
Votes
1
Reply
311
Views
Comment:
C: target gene selection for miRNA
2.1 years ago
karthic
• 100
0
Votes
1
Reply
468
Views
Comment:
C: Creating interaction network using cytoscape
2.1 years ago
karthic
• 100
1
Vote
1
Reply
316
Views
Comment:
C: num_threads with blastn in blast 2.6.0+
2.1 years ago
karthic
• 100
0
Votes
0
Replies
564
Views
Answer:
A: Coloring nodes by tip label attribute in figtree
2.2 years ago
karthic
• 100
0
Votes
0
Replies
211
Views
Comment:
C: Protein Structure and Sequence Assessment
2.2 years ago
karthic
• 100
0
Votes
0
Replies
203
Views
Comment:
C: How do I study a drug target (Thioredoxin Reductase) in Giardia using data from
2.2 years ago
karthic
• 100
0
Votes
1
Reply
768
Views
Comment:
C: So frustrated compiling necessary packages in a linux system
2.3 years ago
karthic
• 100
0
Votes
2
Replies
768
Views
Comment:
C: So frustrated compiling necessary packages in a linux system
2.3 years ago
karthic
• 100
0
Votes
0
Replies
256
Views
Comment:
C: how to find the target sequence for protein modeling?
2.3 years ago
karthic
• 100
0
Votes
0
Replies
238
Views
Comment:
C: Annotate coding sequences
2.3 years ago
karthic
• 100
0
Votes
1
Reply
238
Views
Comment:
C: Annotate coding sequences
2.3 years ago
karthic
• 100
0
Votes
4
Replies
238
Views
Annotate coding sequences
annotation
sequence analysis
2.3 years ago
karthic
• 100
0
Votes
1
Reply
365
Views
Comment:
C: compare two list of nucleotide sequences
2.3 years ago
karthic
• 100
0
Votes
1
Reply
365
Views
Comment:
C: compare two list of nucleotide sequences
2.3 years ago
karthic
• 100
0
Votes
0
Replies
365
Views
Comment:
C: compare two list of nucleotide sequences
2.3 years ago
karthic
• 100
4
Votes
7
Replies
365
Views
compare two list of nucleotide sequences
blast
bowtie
mummer
sequence
2.3 years ago
karthic
• 100
• updated 2.3 years ago
Joe
12k
0
Votes
0
Replies
289
Views
Comment:
C: How to identify interactive partners that contact a specific residues in a prote
2.3 years ago
karthic
• 100
0
Votes
0
Replies
389
Views
Comment:
C: How to predict receptors of a ligand?
2.3 years ago
karthic
• 100
0
Votes
1
Reply
668
Views
Comment:
C: Aligning miRNA reads to miRbase
2.3 years ago
karthic
• 100
0
Votes
0
Replies
401
Views
Comment:
C: Masurca assembly denovo
2.3 years ago
karthic
• 100
0
Votes
0
Replies
298
Views
Generating read counts for my microRNA reads for a non model invertebrate
microrna
htseq
read count
small rna
2.3 years ago
karthic
• 100
0
Votes
1
Reply
401
Views
Comment:
C: Masurca assembly denovo
2.3 years ago
karthic
• 100
0
Votes
0
Replies
247
Views
Comment:
C: For Generating PPI
2.3 years ago
karthic
• 100
0
Votes
1
Reply
509
Views
Comment:
C: Remove dublicate lines basedon specific columns
2.3 years ago
karthic
• 100
• updated 2.3 years ago
RamRS
21k
0
Votes
0
Replies
509
Views
Comment:
C: Remove dublicate lines basedon specific columns
2.3 years ago
karthic
• 100
5
Votes
0
Replies
299
Views
Answer:
A: perl script for discarding sequences less than 200 nucleotides before running C
2.3 years ago
karthic
• 100
0
Votes
0
Replies
326
Views
Comment:
C: any tool t make plots from blast output
2.3 years ago
karthic
• 100
0
Votes
1
Reply
721
Views
Comment:
A: filtering the reads based on the length
2.3 years ago
karthic
• 100
1
Vote
0
Replies
333
Views
Comment:
C: Computational tools and softwares
2.3 years ago
karthic
• 100
0
Votes
1
Reply
671
Views
Comment:
C: Bioinformatics terms that might be confusing for beginners
2.3 years ago
karthic
• 100
1
Vote
1
Reply
333
Views
Answer:
A: Computational tools and softwares
2.3 years ago
karthic
• 100
0
Votes
1
Reply
668
Views
Answer:
A: Aligning miRNA reads to miRbase
2.3 years ago
karthic
• 100
0
Votes
1
Reply
671
Views
Comment:
C: Bioinformatics terms that might be confusing for beginners
2.3 years ago
karthic
• 100
0
Votes
0
Replies
239
Views
Answer:
A: how to choose the blastp output results?
2.3 years ago
karthic
• 100
0
Votes
3
Replies
226
Views
Extract sequences which do not have blast hits
RNA-Seq
sequence
blast
extraction
2.3 years ago
karthic
• 100
0
Votes
0
Replies
226
Views
Comment:
C: Extract sequences which do not have blast hits
2.3 years ago
karthic
• 100
0
Votes
1
Reply
226
Views
Answer:
A: Extract sequences which do not have blast hits
2.3 years ago
karthic
• 100
0
Votes
0
Replies
1.7k
Views
Comment:
C: kraken: unable to download the databases from ncbi
3.0 years ago
karthic
• 100
0
Votes
0
Replies
1.7k
Views
Comment:
C: kraken: unable to download the databases from ncbi
3.0 years ago
karthic
• 100
0
Votes
1
Reply
1.7k
Views
Comment:
C: kraken: unable to download the databases from ncbi
3.0 years ago
karthic
• 100
7
Votes
15
Replies
1.7k
Views
8 follow
kraken: unable to download the databases from ncbi
RNA-Seq
genome
next-gen
software error
Assembly
3.0 years ago
karthic
• 100
• updated 3.0 years ago
Joseph Hughes
♦ 2.7k
0
Votes
0
Replies
1.5k
Views
Comment:
C: Genome size estimation using jellyfish
3.3 years ago
karthic
• 100
0
Votes
1
Reply
1.5k
Views
Comment:
C: Genome size estimation using jellyfish
3.3 years ago
karthic
• 100
4
Votes
7
Replies
2.0k
Views
Any methods available to do QC analysis of Pacbio raw data??
Assembly
genome
Pacbio
next-gen
sequencing
3.3 years ago
karthic
• 100
• updated 3.3 years ago
JstRoRR
• 60
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