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Mike Smith ♦ 1.2k
Status: New
Handle: @Mike Smith4156
Reputation: 1210
Joined: 19 months ago
Last seen: 19 months ago
Location: EMBL Heidelberg / de.NBI

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1
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1
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203
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Comment: C: converting mouse emsembl gene IDs to Gene names by bioMart and gconvert with n
19 months ago
Mike Smith ♦ 1.2k
1
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0
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193
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Answer: A: BioMart : Retrieve set_gene_id (ENSG) and set_transcript_id (ENST) from SNPs rs
19 months ago
Mike Smith ♦ 1.2k
1
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0
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163
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Answer: A: biomaRt query Error "no upstream flank found"
20 months ago
Mike Smith ♦ 1.2k
0
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1
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201
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Comment: C: Finding if dbSNP type in biomart
20 months ago
Mike Smith ♦ 1.2k
1
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0
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201
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Answer: A: Finding if dbSNP type in biomart
20 months ago
Mike Smith ♦ 1.2k
1
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0
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164
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Answer: A: Biomart select rRNA sequences
20 months ago
Mike Smith ♦ 1.2k
1
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0
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205
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Answer: C: Mysterious genes in my Biomart results (genes that were not part of original que
21 months ago
Mike Smith ♦ 1.2k
4
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0
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248
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Answer: A: Error in biomart connection
22 months ago
Mike Smith ♦ 1.2k
2
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0
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217
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Answer: A: why does my biomaRt query return inconsistent dataset lists?
22 months ago
Mike Smith ♦ 1.2k
1
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0
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225
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Comment: C: Different results from biomaRt query and search in GTF
22 months ago
Mike Smith ♦ 1.2k
3
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0
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271
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Answer: A: How can I download data from plants.ensembl.org using wget in biomart?
23 months ago
Mike Smith ♦ 1.2k
3
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0
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273
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Answer: A: Different filters for wheat in biomaRt package and website
24 months ago
Mike Smith ♦ 1.2k
3
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0
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515
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Answer: A: BiomaRt: archive version of ensembl not working
2.0 years ago
Mike Smith ♦ 1.2k
2
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1
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523
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Comment: C: annotation - biomaRt - getBM - multiple entrez ID
2.1 years ago
Mike Smith ♦ 1.2k
5
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0
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526
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Answer: A: How to extract all attribute from Biomart?
2.1 years ago
Mike Smith ♦ 1.2k
0
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0
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852
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Comment: C: BioMart: connection fails
2.2 years ago
Mike Smith ♦ 1.2k
2
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1
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435
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Answer: A: Trying to add ensembl_transcript_id using Biomart
2.3 years ago
Mike Smith ♦ 1.2k
1
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0
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276
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Answer: A: Biomart package listFilter function with with_mirbase vs other mir information
2.4 years ago
Mike Smith ♦ 1.2k
4
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0
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618
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Answer: A: biomaRt rnorvegicus_gene_ensembl dataset is not valid!
2.5 years ago
Mike Smith ♦ 1.2k
1
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0
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618
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Comment: C: biomaRt rnorvegicus_gene_ensembl dataset is not valid!
2.5 years ago
Mike Smith ♦ 1.2k
4
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1
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540
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Answer: A: Find all rsid synonyms for a list of rsids
2.6 years ago
Mike Smith ♦ 1.2k
2
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1
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1.1k
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Comment: C: Obtaining rsIDs using BiomaRt or linux
2.6 years ago
Mike Smith ♦ 1.2k
2
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0
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386
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Answer: A: How to avoid annotating multiple genes to a single CpG locus?
2.6 years ago
Mike Smith ♦ 1.2k
5
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2
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852
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Answer: A: BioMart: connection fails
2.7 years ago
Mike Smith ♦ 1.2k
3
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0
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518
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Answer: A: Query Genes within regions
2.7 years ago
Mike Smith ♦ 1.2k
0
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0
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535
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Comment: C: Where can I download homo sapiens gene locations file including ensembl gene id,
2.7 years ago
Mike Smith ♦ 1.2k
3
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0
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2.0k
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Answer: A: Mapping Ensembl Gene IDs with dot suffix
2.9 years ago
Mike Smith ♦ 1.2k
7
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0
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3.3k
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Answer: A: Get gene symbols from gene ids for mouse using BioMart
2.9 years ago
Mike Smith ♦ 1.2k
0
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0
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765
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Answer: A: R ShortRead : Merge list of ShortReadQ object
2.9 years ago
Mike Smith ♦ 1.2k
0
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0
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1.6k
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Comment: C: 98.21% of input gene IDs are fail to map
3.0 years ago
Mike Smith ♦ 1.2k
3
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1
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1.6k
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Answer: A: 98.21% of input gene IDs are fail to map
3.0 years ago
Mike Smith ♦ 1.2k
4
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1
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8.5k
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Answer: C: How can I uninstall my packages in Rstudio
3.0 years ago
Mike Smith ♦ 1.2k
0
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0
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527
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Comment: C: Error in BioMartVersion
3.0 years ago
Mike Smith ♦ 1.2k
2
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1
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795
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Answer: A: Error using BioMart. No encoding supplied.
3.0 years ago
Mike Smith ♦ 1.2k
1
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1
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3.9k
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Comment: C: biomaRt mmusculus_gene_ensembl dataset
3.1 years ago
Mike Smith ♦ 1.2k
0
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1
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3.9k
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Comment: C: biomaRt mmusculus_gene_ensembl dataset
3.1 years ago
Mike Smith ♦ 1.2k
6
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1
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3.9k
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Answer: A: biomaRt mmusculus_gene_ensembl dataset
3.1 years ago
Mike Smith ♦ 1.2k
5
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1
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744
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Answer: A: biomaRt: Cannot access the zebra fish dataset
3.1 years ago
Mike Smith ♦ 1.2k
0
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0
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657
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Answer: A: Trying to map informations between two Mus musculus strains with biomaRt externa
3.1 years ago
Mike Smith ♦ 1.2k
1
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2
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3.2k
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Comment: C: 'BiocParallel' did not register default BiocParallelParams
3.2 years ago
Mike Smith ♦ 1.2k
1
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1
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2.4k
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Comment: C: Is biomaRt service down?
3.2 years ago
Mike Smith ♦ 1.2k
2
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1
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2.4k
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Answer: A: Is biomaRt service down?
3.2 years ago
Mike Smith ♦ 1.2k
0
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1
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666
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Comment: C: R biomaRt snp_mart down?
3.3 years ago
Mike Smith ♦ 1.2k
3
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0
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1.0k
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Answer: A: Error accessing ensembl biomart via BiomaRt R package
3.3 years ago
Mike Smith ♦ 1.2k
1
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1
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1.0k
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Comment: C: Error accessing ensembl biomart via BiomaRt R package
3.3 years ago
Mike Smith ♦ 1.2k
2
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0
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825
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Comment: C: Inconsistencies in Using biomaRt to Retrieve HGNC Names from GO Terms
3.3 years ago
Mike Smith ♦ 1.2k
4
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1
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1.2k
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Answer: A: Retrieving phytozome data using the R bioconductor package biomaRt
3.4 years ago
Mike Smith ♦ 1.2k
0
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0
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915
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Comment: C: Converting between Ensembl Versions
3.5 years ago
Mike Smith ♦ 1.2k
2
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1
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915
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Answer: A: Converting between Ensembl Versions
3.5 years ago
Mike Smith ♦ 1.2k
2
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1
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849
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Answer: A: Retrieve all genes under a mammalian phenotype ontology term
3.7 years ago
Mike Smith ♦ 1.2k
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