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166
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Comment: Comment: QC exclusion of A/T or G/C alleles to avoid strand issues
18 hours ago by bk11 ★ 2.3k
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0
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346
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Comment: Comment: How to get the reference panel for UKBB
1 day ago by bk11 ★ 2.3k
2
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1
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207
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Answer: Answer: How to filter columns in a raw sparse matrix in R
2 days ago by bk11 ★ 2.3k
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0
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338
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Comment: Comment: Rename multiple fastq.gz files
2 days ago by bk11 ★ 2.3k
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1
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338
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Comment: Comment: Rename multiple fastq.gz files
2 days ago by bk11 ★ 2.3k
1
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1
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338
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Answer: Answer: Rename multiple fastq.gz files
2 days ago by bk11 ★ 2.3k
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0
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170
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Comment: Comment: How to get the reference panel sites for TOPMed hg37 and 38
3 days ago by bk11 ★ 2.3k
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0
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161
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Answer: Answer: convert h5ad to rds
8 days ago by bk11 ★ 2.3k
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0
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546
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Comment: Comment: 99.9999% of Q30 bases is normal?
8 days ago by bk11 ★ 2.3k
2
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1
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271
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Comment: Comment: Addmetadata to seurat obj
8 days ago by bk11 ★ 2.3k
1
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1
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203
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Comment: Comment: convert a seurat object to expressionset
8 days ago by bk11 ★ 2.3k
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1
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552
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
17 days ago by bk11 ★ 2.3k
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0
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216
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Comment: Comment: Cell type classification using an integrated reference
17 days ago by bk11 ★ 2.3k
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0
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194
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Answer: Answer: RNA-seq with normalized cpm count
24 days ago by bk11 ★ 2.3k
0
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1
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428
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Answer: Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
29 days ago by bk11 ★ 2.3k
1
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1
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269
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Answer: Answer: Seurat: CreateSeuratObject error, please help
5 weeks ago by bk11 ★ 2.3k
3
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0
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497
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Answer: Answer: SHAPEIT5 phasing
6 weeks ago by bk11 ★ 2.3k
1
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1
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355
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Comment: Comment: How to find what is the most significantly modulated gene in GEO2R analysis?
8 weeks ago by bk11 ★ 2.3k
0
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1
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333
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Answer: Answer: Converting SNP data table into .traw format or qtl (R) format
8 weeks ago by bk11 ★ 2.3k
1
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1
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747
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Comment: Comment: ensembl - selecting SNPs of specific genes
9 weeks ago by bk11 ★ 2.3k
0
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1
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747
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Comment: Comment: ensembl - selecting SNPs of specific genes
9 weeks ago by bk11 ★ 2.3k
1
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1
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747
views
Comment: Comment: ensembl - selecting SNPs of specific genes
9 weeks ago by bk11 ★ 2.3k
3
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1
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747
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Answer: Answer: ensembl - selecting SNPs of specific genes
9 weeks ago by bk11 ★ 2.3k
1
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0
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237
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Answer: Answer: 1000 genome project specific genes selection
9 weeks ago by bk11 ★ 2.3k
0
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0
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440
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Answer: Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
9 weeks ago by bk11 ★ 2.3k
0
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0
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268
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Comment: Comment: X chromosome inactivation
9 weeks ago by bk11 ★ 2.3k
0
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0
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262
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Answer: Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
9 weeks ago by bk11 ★ 2.3k
0
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0
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393
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Comment: Comment: Need suggestions for ROC Curve in R
9 weeks ago by bk11 ★ 2.3k
0
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0
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245
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Comment: Comment: CellPlex CMO highbackground
9 weeks ago by bk11 ★ 2.3k
0
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1
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459
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Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
10 weeks ago by bk11 ★ 2.3k
0
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1
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459
views
Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
10 weeks ago by bk11 ★ 2.3k
0
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1
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319
views
Comment: Comment: How to choose --hwe threshold?
10 weeks ago by bk11 ★ 2.3k
1
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0
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399
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Comment: Comment: Merge seurat list
10 weeks ago by bk11 ★ 2.3k
0
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0
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361
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Comment: Comment: GO enrichment plot with dotplot strange axis
10 weeks ago by bk11 ★ 2.3k
1
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1
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399
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Answer: Answer: Merge seurat list
10 weeks ago by bk11 ★ 2.3k
0
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1
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361
views
Comment: Comment: GO enrichment plot with dotplot strange axis
10 weeks ago by bk11 ★ 2.3k
2
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1
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487
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Answer: Answer: Splitting scRNA seq data from Multiome data(scRNA+ scATAC)
updated 9 weeks ago by 43k • written 10 weeks ago by ★ 2.3k
1
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1
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1.1k
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Answer: Answer: Issues with Merging Seurat Objects: Multiple Counts in Assays Layer
10 weeks ago by bk11 ★ 2.3k
0
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1
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469
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Comment: Comment: How to find SNP locations in assemblies other than hg38
10 weeks ago by bk11 ★ 2.3k
1
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0
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298
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Answer: Answer: Extract information of mapped reads bam files
10 weeks ago by bk11 ★ 2.3k
2
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1
reply
988
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Comment: Comment: Shrink logFC values after edgeR
11 weeks ago by bk11 ★ 2.3k
0
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0
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239
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Comment: Comment: Is it possible to identify the strand of an RNA using UMI?
11 weeks ago by bk11 ★ 2.3k
0
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1
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507
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Comment: Comment: Does salmon work with combined short and long read bam file?
11 weeks ago by bk11 ★ 2.3k
0
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1
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470
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Comment: Comment: allele matching between identical genotypes
11 weeks ago by bk11 ★ 2.3k
0
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0
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219
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Comment: Comment: EnhancedVolcanop plot using GSE data
11 weeks ago by bk11 ★ 2.3k
1
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1
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419
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Comment: Comment: 1000G Reference Panel Hg38 Michigan Imputation Server
11 weeks ago by bk11 ★ 2.3k
2
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1
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563
views
Comment: Comment: PCA plot interpretation (single population)
11 weeks ago by bk11 ★ 2.3k
0
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0
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243
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Answer: Answer: Obtain rsID GWAS variants (9M)
11 weeks ago by bk11 ★ 2.3k
2
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0
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267
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Answer: Answer: Data scaling in single-cell RNAseq - sample-wise or on the full set?
11 weeks ago by bk11 ★ 2.3k
0
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1
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354
views
Comment: Comment: GEO Affymetrix data for differential expression analysis?
3 months ago by bk11 ★ 2.3k
378 results • Page 1 of 8
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