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jean.elbers ♦ 1.1k
Status: New
Handle: @jean.elbers40003
Reputation: 1070
Email: j*********@gmail.com
Joined: 16 months ago
Last seen: 17 months ago
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Comment: C: repeatmasker species setting
17 months ago
jean.elbers ♦ 1.1k
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182
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Comment: C: repeatmasker species setting
17 months ago
jean.elbers ♦ 1.1k
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1
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132
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Comment: C: Difference between 'raw reads' and 'spots' in PacBio and SRA
17 months ago
jean.elbers ♦ 1.1k
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1
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132
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Comment: C: Difference between 'raw reads' and 'spots' in PacBio and SRA
17 months ago
jean.elbers ♦ 1.1k
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111
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Comment: C: How to creat *over.chain.gz file
17 months ago
jean.elbers ♦ 1.1k
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111
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Comment: C: How to creat *over.chain.gz file
17 months ago
jean.elbers ♦ 1.1k
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196
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Answer: A: Improve illumina short read assembly using PacBio long reads
17 months ago
jean.elbers ♦ 1.1k
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165
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Comment: C: MAKER installation problem: External Programs
17 months ago
jean.elbers ♦ 1.1k
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145
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Comment: C: Finding upstream or downstream sequences on BLAST on linux
18 months ago
jean.elbers ♦ 1.1k
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266
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Comment: C: Retraining Augustus with BUSCO
18 months ago
jean.elbers ♦ 1.1k
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1
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266
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Comment: C: Retraining Augustus with BUSCO
18 months ago
jean.elbers ♦ 1.1k
2
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266
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Answer: C: Retraining Augustus with BUSCO
18 months ago
jean.elbers ♦ 1.1k
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191
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Comment: C: Why some genome assemblies don't have annotation?
18 months ago
jean.elbers ♦ 1.1k
2
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191
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Comment: C: Why some genome assemblies don't have annotation?
18 months ago
jean.elbers ♦ 1.1k
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190
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Comment: C: Summary from a vcf file
18 months ago
jean.elbers ♦ 1.1k
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223
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Comment: C: Split comma seperated list of GO terms into multiple rows and maintain gene iden
18 months ago
jean.elbers ♦ 1.1k
3
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223
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Answer: C: Split comma seperated list of GO terms into multiple rows and maintain gene iden
18 months ago
jean.elbers ♦ 1.1k
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
18 months ago
jean.elbers ♦ 1.1k
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
18 months ago
jean.elbers ♦ 1.1k
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2.2k
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Comment: C: Racon-Illumina or Pilon?
18 months ago
jean.elbers ♦ 1.1k
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
18 months ago
jean.elbers ♦ 1.1k
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2.2k
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Comment: C: Racon-Illumina or Pilon?
18 months ago
jean.elbers ♦ 1.1k
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190
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Comment: C: annotate gene feature
18 months ago
jean.elbers ♦ 1.1k
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205
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Comment: C: Convert Braker2 gff3 to EMBL flat file for ENA submission
18 months ago
jean.elbers ♦ 1.1k
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190
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Comment: C: annotate gene feature
18 months ago
jean.elbers ♦ 1.1k
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261
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Comment: C: Ensembl gene annotation GRCh37.87
18 months ago
jean.elbers ♦ 1.1k
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198
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Comment: C: Why call variant generate homozygous site with genotype 0/0, why it be reporte
18 months ago
jean.elbers ♦ 1.1k
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197
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Comment: C: conversion of gene ids into ensembl id
18 months ago
jean.elbers ♦ 1.1k
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143
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Comment: C: How to transfer gff3 annotation from scaffolds to reference genome?
18 months ago
jean.elbers ♦ 1.1k
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1
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198
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Comment: C: Why call variant generate homozygous site with genotype 0/0, why it be reporte
18 months ago
jean.elbers ♦ 1.1k
0
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1
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
18 months ago
jean.elbers ♦ 1.1k
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1
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360
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Comment: C: Distribute proportionality calculations on many nodes (SLURM)
18 months ago
jean.elbers ♦ 1.1k
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1
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197
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Answer: A: conversion of gene ids into ensembl id
18 months ago
jean.elbers ♦ 1.1k
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164
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Comment: C: Help fixing issue with genbank submission (FeatureBeginsOrEndsInGap)
18 months ago
jean.elbers ♦ 1.1k
2
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261
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Comment: C: Ensembl gene annotation GRCh37.87
18 months ago
jean.elbers ♦ 1.1k
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1
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261
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Comment: C: Ensembl gene annotation GRCh37.87
18 months ago
jean.elbers ♦ 1.1k
2
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1
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261
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Comment: C: Ensembl gene annotation GRCh37.87
18 months ago
jean.elbers ♦ 1.1k
0
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1
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
18 months ago
jean.elbers ♦ 1.1k
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436
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Comment: C: How to count the length of fasta sequences?
18 months ago
jean.elbers ♦ 1.1k
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2
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166
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Comment: C: which file used for GO
18 months ago
jean.elbers ♦ 1.1k
5
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376
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Answer: A: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
18 months ago
jean.elbers ♦ 1.1k
3
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1
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2.1k
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Answer: A: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
19 months ago
jean.elbers ♦ 1.1k
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2.1k
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Comment: C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
19 months ago
jean.elbers ♦ 1.1k
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2
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209
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Comment: C: Error while running SNPEff
19 months ago
jean.elbers ♦ 1.1k
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206
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Comment: C: Your favourite workflow for Hi-C data analysis (Plant Genome)
19 months ago
jean.elbers ♦ 1.1k
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145
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Comment: C: views on vgteam codebase on gituhb?
19 months ago
jean.elbers ♦ 1.1k
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211
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Comment: C: How to make interval list for GBS sequencing?
19 months ago
jean.elbers ♦ 1.1k
1
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1
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211
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Comment: C: How to make interval list for GBS sequencing?
19 months ago
jean.elbers ♦ 1.1k
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1
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305
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Comment: C: Quality control after genotype imputation
19 months ago
jean.elbers ♦ 1.1k
1
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304
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Comment: C: All SNPs excluded with LD pruning
19 months ago
jean.elbers ♦ 1.1k
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1
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140
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Comment: C: RadSeq and short read
19 months ago
jean.elbers ♦ 1.1k
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197
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Comment: C: Program for Amplicon (MHC) Analysis?
19 months ago
jean.elbers ♦ 1.1k
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1
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193
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Comment: C: Calibration of Ultramatric species phylogeny tree?
19 months ago
jean.elbers ♦ 1.1k
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1
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197
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Comment: C: Program for Amplicon (MHC) Analysis?
19 months ago
jean.elbers ♦ 1.1k
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142
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Comment: C: Setting bins on whole Genome to take snapshots at SV possible positions
19 months ago
jean.elbers ♦ 1.1k
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371
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Comment: C: How to report genomic intervals essentailly overlapping in all files?
19 months ago
jean.elbers ♦ 1.1k
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1
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371
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Comment: C: How to report genomic intervals essentailly overlapping in all files?
19 months ago
jean.elbers ♦ 1.1k
3
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1
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371
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Answer: A: How to report genomic intervals essentailly overlapping in all files?
19 months ago
jean.elbers ♦ 1.1k
1
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1
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371
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Comment: C: How to report genomic intervals essentailly overlapping in all files?
19 months ago
jean.elbers ♦ 1.1k
1
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1
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187
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Answer: A: How to do synteny analysis between two bacterial genome?
20 months ago
jean.elbers ♦ 1.1k
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187
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Comment: C: How to do synteny analysis between two bacterial genome?
20 months ago
jean.elbers ♦ 1.1k
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1
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174
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Comment: C: Statistics of amino acid usage of multiple aligned sequences?
20 months ago
jean.elbers ♦ 1.1k
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4.3k
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Comment: C: How to subset a bed or gtf file to some genes of interest?
20 months ago
jean.elbers ♦ 1.1k
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1
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305
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Comment: C: Quality control after genotype imputation
20 months ago
jean.elbers ♦ 1.1k
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2
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174
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Comment: C: what "Main genome assembly score" in the output file of BBMap mean when evaluati
20 months ago
jean.elbers ♦ 1.1k
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305
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Comment: C: Quality control after genotype imputation
20 months ago
jean.elbers ♦ 1.1k
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1
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203
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Comment: C: Getting DNA sequence from a genome knowing the start and end position
20 months ago
jean.elbers ♦ 1.1k
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1.5k
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Comment: C: convert BUSCO gff files to SNAP HMMs
20 months ago
jean.elbers ♦ 1.1k
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529
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Comment: C: sra-explorer : find SRA and FastQ download URLs in a couple of clicks
20 months ago
jean.elbers ♦ 1.1k
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333
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Comment: C: How to extract organisms name from the headers in a multi-fasta file?
20 months ago
jean.elbers ♦ 1.1k
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1
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333
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Comment: C: How to extract organisms name from the headers in a multi-fasta file?
20 months ago
jean.elbers ♦ 1.1k
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145
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Answer: A: Comparing the size of assemblies, contiguity and busco stats of multiple isolate
20 months ago
jean.elbers ♦ 1.1k
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459
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Comment: C: How to get proteins from GFF file resulted from MAKER annotation
20 months ago
jean.elbers ♦ 1.1k
1
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1
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459
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Comment: C: How to get proteins from GFF file resulted from MAKER annotation
20 months ago
jean.elbers ♦ 1.1k
1
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1
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459
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Comment: C: How to get proteins from GFF file resulted from MAKER annotation
20 months ago
jean.elbers ♦ 1.1k
2
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1
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459
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Answer: A: How to get proteins from GFF file resulted from MAKER annotation
20 months ago
jean.elbers ♦ 1.1k
5
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1
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421
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Answer: A: Random SNPs simulation?
20 months ago
jean.elbers ♦ 1.1k
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618
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Comment: C: PacBio sequencing for variant calling?
21 months ago
jean.elbers ♦ 1.1k
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286
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Comment: C: Estimate insert size for pacbio long reads
22 months ago
jean.elbers ♦ 1.1k
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0
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308
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Comment: C: How to do AMOVA on GBS data
22 months ago
jean.elbers ♦ 1.1k
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1
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308
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Comment: C: How to do AMOVA on GBS data
22 months ago
jean.elbers ♦ 1.1k
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1
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676
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Comment: C: RepeatMasker Library Help
22 months ago
jean.elbers ♦ 1.1k
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301
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Comment: C: filter genome above N50 value
23 months ago
jean.elbers ♦ 1.1k
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1
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551
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Comment: C: Gff3 file issues
23 months ago
jean.elbers ♦ 1.1k
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401
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Comment: C: Is there a tool for making a synteny blocks of a gene with its downstream and up
23 months ago
jean.elbers ♦ 1.1k
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1
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401
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Comment: C: Is there a tool for making a synteny blocks of a gene with its downstream and up
23 months ago
jean.elbers ♦ 1.1k
1
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1
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501
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Comment: C: Genome de novo annotation with Maker
23 months ago
jean.elbers ♦ 1.1k
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0
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203
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Comment: C: Tools for integrating the long reads transcriptomic data into reference genome w
23 months ago
jean.elbers ♦ 1.1k
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1
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1.9k
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Comment: C: Dealing with half missing calls in ".ped" file
23 months ago
jean.elbers ♦ 1.1k
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281
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Answer: A: Unable to designate CSV column heads "as.factor" for R -Error
23 months ago
jean.elbers ♦ 1.1k
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1
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253
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Comment: C: Need help to separate a genome in different x coverage
23 months ago
jean.elbers ♦ 1.1k
2
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1
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253
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Comment: C: Need help to separate a genome in different x coverage
23 months ago
jean.elbers ♦ 1.1k
2
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0
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314
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Answer: A: How can I assembly big genome by abyss with 128 Gb ram
24 months ago
jean.elbers ♦ 1.1k
2
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1
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501
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Answer: A: Genome de novo annotation with Maker
24 months ago
jean.elbers ♦ 1.1k
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0
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366
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Answer: A: Reference based assembly
24 months ago
jean.elbers ♦ 1.1k
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1
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498
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Comment: C: Assembly with ABySS, Kmer optimisation
2.0 years ago
jean.elbers ♦ 1.1k
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0
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283
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Comment: C: Tadpole assembler header
2.0 years ago
jean.elbers ♦ 1.1k
1
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1
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283
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Comment: C: Tadpole assembler header
2.0 years ago
jean.elbers ♦ 1.1k
3
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227
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Answer: A: Constructing nucleotide sequence after incorporating SNPs from SIFT file
2.1 years ago
jean.elbers ♦ 1.1k
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0
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498
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Comment: C: Assembly with ABySS, Kmer optimisation
2.1 years ago
jean.elbers ♦ 1.1k
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