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jean.elbers ♦ 1.1k
Status: New
Handle: @jean.elbers40003
Reputation: 1070
Email: j*********@gmail.com
Joined: 13 months ago
Last seen: 14 months ago
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1
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178
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Comment: C: repeatmasker species setting
14 months ago
jean.elbers ♦ 1.1k
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2
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178
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Comment: C: repeatmasker species setting
14 months ago
jean.elbers ♦ 1.1k
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1
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131
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Comment: C: Difference between 'raw reads' and 'spots' in PacBio and SRA
14 months ago
jean.elbers ♦ 1.1k
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1
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131
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Comment: C: Difference between 'raw reads' and 'spots' in PacBio and SRA
14 months ago
jean.elbers ♦ 1.1k
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111
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Comment: C: How to creat *over.chain.gz file
14 months ago
jean.elbers ♦ 1.1k
1
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1
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111
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Comment: C: How to creat *over.chain.gz file
14 months ago
jean.elbers ♦ 1.1k
1
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194
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Answer: A: Improve illumina short read assembly using PacBio long reads
14 months ago
jean.elbers ♦ 1.1k
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163
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Comment: C: MAKER installation problem: External Programs
15 months ago
jean.elbers ♦ 1.1k
1
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144
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Comment: C: Finding upstream or downstream sequences on BLAST on linux
15 months ago
jean.elbers ♦ 1.1k
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0
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265
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Comment: C: Retraining Augustus with BUSCO
15 months ago
jean.elbers ♦ 1.1k
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1
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265
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Comment: C: Retraining Augustus with BUSCO
15 months ago
jean.elbers ♦ 1.1k
2
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1
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265
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Answer: C: Retraining Augustus with BUSCO
15 months ago
jean.elbers ♦ 1.1k
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191
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Comment: C: Why some genome assemblies don't have annotation?
15 months ago
jean.elbers ♦ 1.1k
2
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1
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191
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Comment: C: Why some genome assemblies don't have annotation?
15 months ago
jean.elbers ♦ 1.1k
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190
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Comment: C: Summary from a vcf file
15 months ago
jean.elbers ♦ 1.1k
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222
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Comment: C: Split comma seperated list of GO terms into multiple rows and maintain gene iden
15 months ago
jean.elbers ♦ 1.1k
3
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1
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222
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Answer: C: Split comma seperated list of GO terms into multiple rows and maintain gene iden
15 months ago
jean.elbers ♦ 1.1k
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
15 months ago
jean.elbers ♦ 1.1k
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0
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
15 months ago
jean.elbers ♦ 1.1k
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0
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2.2k
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Comment: C: Racon-Illumina or Pilon?
15 months ago
jean.elbers ♦ 1.1k
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0
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
15 months ago
jean.elbers ♦ 1.1k
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0
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2.2k
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Comment: C: Racon-Illumina or Pilon?
15 months ago
jean.elbers ♦ 1.1k
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0
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190
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Comment: C: annotate gene feature
16 months ago
jean.elbers ♦ 1.1k
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205
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Comment: C: Convert Braker2 gff3 to EMBL flat file for ENA submission
16 months ago
jean.elbers ♦ 1.1k
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190
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Comment: C: annotate gene feature
16 months ago
jean.elbers ♦ 1.1k
1
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260
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Comment: C: Ensembl gene annotation GRCh37.87
16 months ago
jean.elbers ♦ 1.1k
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198
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Comment: C: Why call variant generate homozygous site with genotype 0/0, why it be reporte
16 months ago
jean.elbers ♦ 1.1k
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0
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196
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Comment: C: conversion of gene ids into ensembl id
16 months ago
jean.elbers ♦ 1.1k
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143
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Comment: C: How to transfer gff3 annotation from scaffolds to reference genome?
16 months ago
jean.elbers ♦ 1.1k
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1
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198
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Comment: C: Why call variant generate homozygous site with genotype 0/0, why it be reporte
16 months ago
jean.elbers ♦ 1.1k
0
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1
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376
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Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
16 months ago
jean.elbers ♦ 1.1k
0
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1
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356
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Comment: C: Distribute proportionality calculations on many nodes (SLURM)
16 months ago
jean.elbers ♦ 1.1k
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1
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196
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Answer: A: conversion of gene ids into ensembl id
16 months ago
jean.elbers ♦ 1.1k
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0
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162
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Comment: C: Help fixing issue with genbank submission (FeatureBeginsOrEndsInGap)
16 months ago
jean.elbers ♦ 1.1k
2
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260
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Comment: C: Ensembl gene annotation GRCh37.87
16 months ago
jean.elbers ♦ 1.1k
0
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1
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260
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Comment: C: Ensembl gene annotation GRCh37.87
16 months ago
jean.elbers ♦ 1.1k
2
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1
Reply
260
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Comment: C: Ensembl gene annotation GRCh37.87
16 months ago
jean.elbers ♦ 1.1k
0
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1
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376
Views
Comment: C: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
16 months ago
jean.elbers ♦ 1.1k
0
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0
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433
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Comment: C: How to count the length of fasta sequences?
16 months ago
jean.elbers ♦ 1.1k
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2
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165
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Comment: C: which file used for GO
16 months ago
jean.elbers ♦ 1.1k
5
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1
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376
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Answer: A: Best strategy for gene annotation for de novo genome assembly without RNA-seq da
16 months ago
jean.elbers ♦ 1.1k
3
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1
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2.1k
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Answer: A: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
16 months ago
jean.elbers ♦ 1.1k
4
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2.1k
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Comment: C: Who are the Greatest Bioinformaticians Of All Time (GBOAT)
16 months ago
jean.elbers ♦ 1.1k
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2
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209
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Comment: C: Error while running SNPEff
16 months ago
jean.elbers ♦ 1.1k
1
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0
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206
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Comment: C: Your favourite workflow for Hi-C data analysis (Plant Genome)
16 months ago
jean.elbers ♦ 1.1k
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0
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145
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Comment: C: views on vgteam codebase on gituhb?
16 months ago
jean.elbers ♦ 1.1k
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0
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208
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Comment: C: How to make interval list for GBS sequencing?
16 months ago
jean.elbers ♦ 1.1k
1
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1
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208
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Comment: C: How to make interval list for GBS sequencing?
16 months ago
jean.elbers ♦ 1.1k
1
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1
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305
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Comment: C: Quality control after genotype imputation
16 months ago
jean.elbers ♦ 1.1k
1
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0
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304
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Comment: C: All SNPs excluded with LD pruning
16 months ago
jean.elbers ♦ 1.1k
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1
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139
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Comment: C: RadSeq and short read
16 months ago
jean.elbers ♦ 1.1k
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197
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Comment: C: Program for Amplicon (MHC) Analysis?
16 months ago
jean.elbers ♦ 1.1k
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1
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193
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Comment: C: Calibration of Ultramatric species phylogeny tree?
16 months ago
jean.elbers ♦ 1.1k
1
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1
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197
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Comment: C: Program for Amplicon (MHC) Analysis?
17 months ago
jean.elbers ♦ 1.1k
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0
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141
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Comment: C: Setting bins on whole Genome to take snapshots at SV possible positions
17 months ago
jean.elbers ♦ 1.1k
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0
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369
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Comment: C: How to report genomic intervals essentailly overlapping in all files?
17 months ago
jean.elbers ♦ 1.1k
1
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1
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369
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Comment: C: How to report genomic intervals essentailly overlapping in all files?
17 months ago
jean.elbers ♦ 1.1k
3
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1
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369
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Answer: A: How to report genomic intervals essentailly overlapping in all files?
17 months ago
jean.elbers ♦ 1.1k
1
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1
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369
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Comment: C: How to report genomic intervals essentailly overlapping in all files?
17 months ago
jean.elbers ♦ 1.1k
1
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1
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186
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Answer: A: How to do synteny analysis between two bacterial genome?
17 months ago
jean.elbers ♦ 1.1k
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186
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Comment: C: How to do synteny analysis between two bacterial genome?
17 months ago
jean.elbers ♦ 1.1k
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1
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174
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Comment: C: Statistics of amino acid usage of multiple aligned sequences?
17 months ago
jean.elbers ♦ 1.1k
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0
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4.3k
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Comment: C: How to subset a bed or gtf file to some genes of interest?
17 months ago
jean.elbers ♦ 1.1k
1
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1
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305
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Comment: C: Quality control after genotype imputation
17 months ago
jean.elbers ♦ 1.1k
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2
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174
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Comment: C: what "Main genome assembly score" in the output file of BBMap mean when evaluati
17 months ago
jean.elbers ♦ 1.1k
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0
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305
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Comment: C: Quality control after genotype imputation
17 months ago
jean.elbers ♦ 1.1k
1
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1
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203
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Comment: C: Getting DNA sequence from a genome knowing the start and end position
17 months ago
jean.elbers ♦ 1.1k
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1.5k
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Comment: C: convert BUSCO gff files to SNAP HMMs
17 months ago
jean.elbers ♦ 1.1k
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0
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529
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Comment: C: sra-explorer : find SRA and FastQ download URLs in a couple of clicks
17 months ago
jean.elbers ♦ 1.1k
1
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1
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331
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Comment: C: How to extract organisms name from the headers in a multi-fasta file?
17 months ago
jean.elbers ♦ 1.1k
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1
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331
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Comment: C: How to extract organisms name from the headers in a multi-fasta file?
17 months ago
jean.elbers ♦ 1.1k
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0
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145
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Answer: A: Comparing the size of assemblies, contiguity and busco stats of multiple isolate
17 months ago
jean.elbers ♦ 1.1k
1
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0
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459
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Comment: C: How to get proteins from GFF file resulted from MAKER annotation
17 months ago
jean.elbers ♦ 1.1k
1
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1
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459
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Comment: C: How to get proteins from GFF file resulted from MAKER annotation
17 months ago
jean.elbers ♦ 1.1k
1
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1
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459
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Comment: C: How to get proteins from GFF file resulted from MAKER annotation
17 months ago
jean.elbers ♦ 1.1k
2
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1
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459
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Answer: A: How to get proteins from GFF file resulted from MAKER annotation
17 months ago
jean.elbers ♦ 1.1k
5
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1
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366
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Answer: A: Random SNPs simulation?
18 months ago
jean.elbers ♦ 1.1k
0
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0
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618
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Comment: C: PacBio sequencing for variant calling?
18 months ago
jean.elbers ♦ 1.1k
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0
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286
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Comment: C: Estimate insert size for pacbio long reads
19 months ago
jean.elbers ♦ 1.1k
0
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0
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307
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Comment: C: How to do AMOVA on GBS data
19 months ago
jean.elbers ♦ 1.1k
0
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1
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307
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Comment: C: How to do AMOVA on GBS data
19 months ago
jean.elbers ♦ 1.1k
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1
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676
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Comment: C: RepeatMasker Library Help
20 months ago
jean.elbers ♦ 1.1k
0
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0
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300
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Comment: C: filter genome above N50 value
20 months ago
jean.elbers ♦ 1.1k
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1
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549
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Comment: C: Gff3 file issues
20 months ago
jean.elbers ♦ 1.1k
1
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0
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401
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Comment: C: Is there a tool for making a synteny blocks of a gene with its downstream and up
20 months ago
jean.elbers ♦ 1.1k
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1
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401
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Comment: C: Is there a tool for making a synteny blocks of a gene with its downstream and up
20 months ago
jean.elbers ♦ 1.1k
1
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1
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501
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Comment: C: Genome de novo annotation with Maker
21 months ago
jean.elbers ♦ 1.1k
0
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0
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203
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Comment: C: Tools for integrating the long reads transcriptomic data into reference genome w
21 months ago
jean.elbers ♦ 1.1k
0
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1
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1.9k
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Comment: C: Dealing with half missing calls in ".ped" file
21 months ago
jean.elbers ♦ 1.1k
0
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0
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281
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Answer: A: Unable to designate CSV column heads "as.factor" for R -Error
21 months ago
jean.elbers ♦ 1.1k
0
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1
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253
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Comment: C: Need help to separate a genome in different x coverage
21 months ago
jean.elbers ♦ 1.1k
2
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1
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253
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Comment: C: Need help to separate a genome in different x coverage
21 months ago
jean.elbers ♦ 1.1k
2
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0
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314
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Answer: A: How can I assembly big genome by abyss with 128 Gb ram
21 months ago
jean.elbers ♦ 1.1k
2
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1
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501
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Answer: A: Genome de novo annotation with Maker
21 months ago
jean.elbers ♦ 1.1k
0
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0
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366
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Answer: A: Reference based assembly
21 months ago
jean.elbers ♦ 1.1k
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1
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498
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Comment: C: Assembly with ABySS, Kmer optimisation
21 months ago
jean.elbers ♦ 1.1k
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0
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283
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Comment: C: Tadpole assembler header
21 months ago
jean.elbers ♦ 1.1k
1
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1
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283
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Comment: C: Tadpole assembler header
21 months ago
jean.elbers ♦ 1.1k
3
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0
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227
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Answer: A: Constructing nucleotide sequence after incorporating SNPs from SIFT file
22 months ago
jean.elbers ♦ 1.1k
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0
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498
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Comment: C: Assembly with ABySS, Kmer optimisation
22 months ago
jean.elbers ♦ 1.1k
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