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Dattatray Mongad • 290
Status: New
Handle: @Dattatray Mongad31025
Reputation: 290
Joined: 19 months ago
Twitter: DattatrayMongad
Last seen: 23 months ago
Location: National Centre for Cell Science, Pune

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Genome annotation to KEGG KO ids
sequence genome Assembly kegg pathway
2.7 years ago
Dattatray Mongad • 290 • updated 22 months ago
SilentGene • 20
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305
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Answer: A: what is the best method (normalization) to compare RNA-Seq samples from differen
23 months ago
Dattatray Mongad • 290
3
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1
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559
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Answer: A: Can't make program in Python to read FASTA
2.1 years ago
Dattatray Mongad • 290 • updated 2.1 years ago
h.mon 25k
1
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258
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Answer: A: compare expression between the same gene in different organisms?
2.1 years ago
Dattatray Mongad • 290
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347
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Answer: A: Metabolic pathways from list of protein ID numbers
2.2 years ago
Dattatray Mongad • 290
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580
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Answer: A: What is microbiome community structure?
2.2 years ago
Dattatray Mongad • 290
2
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0
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274
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Answer: A: Gut microbe annotation DB
2.2 years ago
Dattatray Mongad • 290
1
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671
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Answer: A: gff3 to gtf conversion
2.2 years ago
Dattatray Mongad • 290
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403
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Comment: C: Amino Acid matrices freely downloadable url
2.3 years ago
Dattatray Mongad • 290
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403
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Answer: A: Amino Acid matrices freely downloadable url
2.3 years ago
Dattatray Mongad • 290
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2.7k
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Answer: A: How to plot length distribution of contigs in the assembly?
2.3 years ago
Dattatray Mongad • 290
0
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1
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381
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Comment: C: Suggestions for better and accurate tool for PanGenome analysis.
2.4 years ago
Dattatray Mongad • 290
0
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4
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381
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Suggestions for better and accurate tool for PanGenome analysis.
sequencing genome gene pangenome
2.4 years ago
Dattatray Mongad • 290
0
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1
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384
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Answer: A: download genbank sequences with exon sequences highlighted
2.4 years ago
Dattatray Mongad • 290
1
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1
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494
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Answer: A: Programmatically retrieve the length of a gene
2.4 years ago
Dattatray Mongad • 290
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1
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437
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Answer: A: Extract Reverse Reads Based on Header Information of Forward Reads
2.4 years ago
Dattatray Mongad • 290
1
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1
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347
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Answer: A: Continuous mismatch at the end of the alignment, how to eliminate it?
2.4 years ago
Dattatray Mongad • 290
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2
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483
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Answer: A: How to create a list of the barcodes located in the read headers of demultiplexe
2.5 years ago
Dattatray Mongad • 290 • updated 2.5 years ago
finswimmer 11k
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493
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Answer: A: Advice for trimming asymmetric adapters for paired end sequencing library
2.5 years ago
Dattatray Mongad • 290
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361
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Answer: A: copy number variation
2.5 years ago
Dattatray Mongad • 290
1
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1
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651
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Answer: A: Qiime - problem with biom package in normalization
2.5 years ago
Dattatray Mongad • 290
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426
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Answer: A: Paired-end and single-end reads combined during RNAseq - acceptable?
2.5 years ago
Dattatray Mongad • 290
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428
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Comment: C: Extract specific fasta sequences from multiple multi-fasta files located in a di
2.5 years ago
Dattatray Mongad • 290
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2
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428
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Answer: A: Extract specific fasta sequences from multiple multi-fasta files located in a di
2.5 years ago
Dattatray Mongad • 290 • updated 2.5 years ago
finswimmer 11k
0
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0
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1.3k
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Answer: A: Gene abundance profile from metagenomics data
2.5 years ago
Dattatray Mongad • 290
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976
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Answer: A: Best way to assign pfam/EC/COGs to a set of proteins
2.5 years ago
Dattatray Mongad • 290
1
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1
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383
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Answer: A: Separate the Longest Strain in Bacteria
2.5 years ago
Dattatray Mongad • 290
2
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0
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438
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Answer: A: Software for Taxonomic Profiling of Fungi
2.5 years ago
Dattatray Mongad • 290
1
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0
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575
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Answer: A: Rstudio like IDE for perl
2.5 years ago
Dattatray Mongad • 290
1
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1
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740
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Answer: A: Trim Paired-end Fastq Files
2.5 years ago
Dattatray Mongad • 290
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482
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Comment: C: How to identify strand of a gene in bacteria?
2.5 years ago
Dattatray Mongad • 290
1
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770
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Answer: A: Removing Duplicates before aligning
2.5 years ago
Dattatray Mongad • 290
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578
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Answer: A: heatmap2 in R, figure doesn't show column name.
2.5 years ago
Dattatray Mongad • 290
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1
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359
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Comment: C: MG-RAST download by job ids.
2.5 years ago
Dattatray Mongad • 290
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337
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Answer: A: Resources for a systems biology approach to multiomics.
2.5 years ago
Dattatray Mongad • 290
1
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1
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612
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Answer: A: R package to perform functional enrichment of clustered human gene data
2.5 years ago
Dattatray Mongad • 290
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483
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Answer: A: How can we customize a SILVA reference database?
2.5 years ago
Dattatray Mongad • 290
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0
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2.4k
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Answer: A: The FDR and P value in RNA-seq analysis
2.5 years ago
Dattatray Mongad • 290
0
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1
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504
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Answer: A: Parsing a FASTQ File
2.5 years ago
Dattatray Mongad • 290
0
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0
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527
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Comment: A: error with add_theme function ggplot2 (R)
2.5 years ago
Dattatray Mongad • 290
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0
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379
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Answer: A: DE seq analysis using transcript expression data
2.5 years ago
Dattatray Mongad • 290
2
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445
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Answer: A: Imbalance up and down regulated genes
2.5 years ago
Dattatray Mongad • 290
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3
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359
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MG-RAST download by job ids.
sequence ngs genome next-gen metagenome
2.5 years ago
Dattatray Mongad • 290
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0
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1.6k
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Comment: A: Assembly of amplicons
2.5 years ago
Dattatray Mongad • 290
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1
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8.1k
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Answer: A: Downloading Data From Mg-Rast
2.5 years ago
Dattatray Mongad • 290
0
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1
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395
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gene copy numbers in an genome
genome next-gen gene
2.6 years ago
Dattatray Mongad • 290
0
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0
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473
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BPGA - how to update KEGG and COG database?
BPGA Assembly sequencing microbes
2.6 years ago
Dattatray Mongad • 290
0
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1
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510
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download KEGG genes sequence in fasta format
kegg genome gene sequence
2.6 years ago
Dattatray Mongad • 290
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1
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2.4k
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Answer: A: BPGA - Bacterial Pan Genome Analysis pipeline
2.6 years ago
Dattatray Mongad • 290
1
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2
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2.5k
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Answer: A: Extract V3-V4 regions from 16s sequences
2.7 years ago
Dattatray Mongad • 290
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