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Comment: Comment: Elusive syntax error in Snakefile
7 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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978
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Comment: Comment: NCBI Gene Table Bulk Download
7 months ago by vkkodali_ncbi ★ 3.7k
1
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1
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978
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Comment: Comment: NCBI Gene Table Bulk Download
7 months ago by vkkodali_ncbi ★ 3.7k
1
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1
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631
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Answer: Answer: RefseqID to gene symbol for multiple species
7 months ago by vkkodali_ncbi ★ 3.7k
2
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0
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1.9k
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Comment: Comment: What does a gene's "aligned length" represent?
7 months ago by vkkodali_ncbi ★ 3.7k
3
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2
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1.9k
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Answer: Answer: What does a gene's "aligned length" represent?
7 months ago by vkkodali_ncbi ★ 3.7k
3
votes
1
reply
765
views
Answer: Answer: SRA and Bioproject IDs
8 months ago by vkkodali_ncbi ★ 3.7k
0
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1
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887
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Answer: Answer: How are duplicated genes named under GTF file?
8 months ago by vkkodali_ncbi ★ 3.7k
2
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0
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1.9k
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Answer: Answer: How can I transfer gene models to a new assembly?
8 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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601
views
Answer: Answer: Does STAR aligner use the maximum memory available?
8 months ago by vkkodali_ncbi ★ 3.7k
1
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0
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799
views
Answer: Answer: Any way to retrieve the annotation information of genomes under a bioproject ? (
12 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.5k
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Comment: Comment: Reference genome
14 months ago by vkkodali_ncbi ★ 3.7k
3
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1
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741
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Answer: Answer: Unknown naming convention for genes
14 months ago by vkkodali_ncbi ★ 3.7k
1
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1
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580
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Answer: Answer: NCBI search with ENTREZ biopython last refseq version tag
14 months ago by vkkodali_ncbi ★ 3.7k
3
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1
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1.1k
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Answer: Answer: gff file from NCBI RefSeq GCF dataset has an invalid format
14 months ago by vkkodali_ncbi ★ 3.7k
1
vote
1
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637
views
Answer: Answer: How do I download all genomes with specific ST type from ncbi
18 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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763
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Answer: Answer: Help with e-utils: Need one assembly accession from one protein accession
21 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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2.5k
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Comment: Comment: What is the command to download GTF from NCBI
22 months ago by vkkodali_ncbi ★ 3.7k
0
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1
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2.5k
views
Comment: Comment: What is the command to download GTF from NCBI
22 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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2.5k
views
Comment: Comment: What is the command to download GTF from NCBI
22 months ago by vkkodali_ncbi ★ 3.7k
0
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2
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2.5k
views
Answer: Answer: What is the command to download GTF from NCBI
22 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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609
views
Comment: Comment: Retrieve nucleotide ID from protein ID
22 months ago by vkkodali_ncbi ★ 3.7k
0
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1
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609
views
Answer: Answer: Retrieve nucleotide ID from protein ID
22 months ago by vkkodali_ncbi ★ 3.7k
3
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1
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968
views
Answer: Answer: _1 in gene_ids of human T2T assemby gtf file
21 months ago by vkkodali_ncbi ★ 3.7k
2
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0
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1.5k
views
Answer: Answer: How to get sample details from NCBI datasets
23 months ago by vkkodali_ncbi ★ 3.7k
4
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0
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1.3k
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Answer: Answer: How to download a large number of protein.faa.gz files from NCBI's FTP site in o
23 months ago by vkkodali_ncbi ★ 3.7k
1
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0
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638
views
Answer: Answer: Parse ncbiRefSeq (other like) annotations
23 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.2k
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Answer: Answer: Donwloading latest version of Mouse ref genome
23 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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754
views
Comment: Comment: Conversion of gene symbol to refSeqID
23 months ago by vkkodali_ncbi ★ 3.7k
0
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1
reply
754
views
Answer: Answer: Conversion of gene symbol to refSeqID
23 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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951
views
Comment: Comment: Genbank | large multi-isolate project
23 months ago by vkkodali_ncbi ★ 3.7k
0
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1
reply
951
views
Comment: Comment: Genbank | large multi-isolate project
23 months ago by vkkodali_ncbi ★ 3.7k
0
votes
1
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951
views
Answer: Answer: Genbank | large multi-isolate project
23 months ago by vkkodali_ncbi ★ 3.7k
3
votes
1
reply
946
views
Answer: Answer: How can I get a taxid from an assembly id (e.g., GCA_003223415.1 -> 2026742)
23 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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481
views
Comment: Comment: how to download NCBI partially non-redundant nucleotide dataset for prokaryotes?
23 months ago by vkkodali_ncbi ★ 3.7k
0
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0
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664
views
Comment: Comment: Retrieving specific subsequences from multiple references on NCBI?
23 months ago by vkkodali_ncbi ★ 3.7k
2
votes
1
reply
798
views
Comment: Comment: Genome Reference Consortium Human Build - Transcriptome Size Query
23 months ago by vkkodali_ncbi ★ 3.7k
3
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1
reply
1.3k
views
Answer: Answer: From GCA identifiers, download Genbank file format?
24 months ago by vkkodali_ncbi ★ 3.7k
1
vote
0
replies
983
views
Comment: Comment: How is the best way to filter a BED file to get specific exons from their gene I
24 months ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
1.2k
views
Comment: Comment: New Human genome FASTA
2.1 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.1k
views
Comment: Comment: Did NCBI deactivate many RefSeq accession numbers?
2.1 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
754
views
Answer: Answer: Edirect query help: How to determine which querys can be linked to a different d
2.1 years ago by vkkodali_ncbi ★ 3.7k
1
vote
0
replies
1.4k
views
Answer: Answer: NCBI Reference Fasta Tar Issues
2.1 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.4k
views
Comment: Comment: convert genome coordinates from b36 to hg19
2.2 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.4k
views
Answer: Answer: convert genome coordinates from b36 to hg19
2.2 years ago by vkkodali_ncbi ★ 3.7k
1
vote
1
reply
642
views
Answer: Answer: The meaning of greter than character (>) in gene position in Genbank files
2.2 years ago by vkkodali_ncbi ★ 3.7k
1
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1
reply
2.2k
views
Answer: Answer: Retrieving gene ID using transcripts ID from Entrez database using CLI or Batc
2.2 years ago by vkkodali_ncbi ★ 3.7k
1
vote
2
replies
1.5k
views
Answer: Answer: Reference genome
2.2 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
978
views
Answer: Answer: How to use efetch to download specific gene from whole genome NCBI by linux term
2.2 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.8k
views
Comment: Comment: NCBI E-eutilitis not working properly inside a while loop
2.2 years ago by vkkodali_ncbi ★ 3.7k
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