Biostar Beta. Not for public use.
Latest
Topics
Tags
News
Jobs
Tutorials
Forum
Planet
Community
New Post
Log In
About
New Post
Latest
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Martombo ♦ 2.4k
Status:
New
Handle:
@Martombo3007
Reputation:
2420
Joined:
20 months ago
Last seen:
22 months ago
Location:
Seville, ES
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
0
Votes
0
Replies
117
Views
Comment:
C: Error in some hog codes using pyham
20 months ago
Martombo
♦ 2.4k
0
Votes
1
Reply
247
Views
Comment:
C: Removing adaptors from smallRNA seq data
20 months ago
Martombo
♦ 2.4k
0
Votes
1
Reply
247
Views
Comment:
C: Removing adaptors from smallRNA seq data
21 months ago
Martombo
♦ 2.4k
0
Votes
1
Reply
352
Views
Comment:
C: Selecting the consensus/overlapped genes from the DE study
21 months ago
Martombo
♦ 2.4k
0
Votes
1
Reply
180
Views
Comment:
C: Finding the best combination of covarites in a multivariate linear regression
21 months ago
Martombo
♦ 2.4k
0
Votes
0
Replies
2.4k
Views
Comment:
C: how to use ESTIMATE to infer tumor purity and stromal score from RNA-seq data?
21 months ago
Martombo
♦ 2.4k
1
Vote
0
Replies
279
Views
Comment:
C: Question about differentially expressed genes selection for low sample size data
22 months ago
Martombo
♦ 2.4k
0
Votes
1
Reply
276
Views
Comment:
C: Differential analysis using cell-line data with replicate information
22 months ago
Martombo
♦ 2.4k
1
Vote
0
Replies
127
Views
Answer:
A: Co-expression analysis for genes coexpressed with gene X, genes X and Y, etc.
22 months ago
Martombo
♦ 2.4k
1
Vote
0
Replies
423
Views
Comment:
C: natural log used in Seurat for differential expression
2.1 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
688
Views
Comment:
C: Read count difference between STAR and Bowtie
2.2 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
428
Views
Comment:
C: STAR Splice Junctions normalization
2.2 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
287
Views
Answer:
A: RNA-binding motifs matching
2.3 years ago
Martombo
♦ 2.4k
1
Vote
0
Replies
236
Views
Answer:
A: comparing two ratios in RNASeq data
2.3 years ago
Martombo
♦ 2.4k
2
Votes
1
Reply
718
Views
Comment:
C: R read.table() saying line does not have correct number of elements - when I che
2.4 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
718
Views
Comment:
C: R read.table() saying line does not have correct number of elements - when I che
2.4 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
337
Views
Answer:
A: Quantifying repetitive elements in RNA-seqs
2.4 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
329
Views
Answer:
C: DESEQ2 control vs multiple treatment
2.4 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
511
Views
Comment:
C: Find out the mutation type from TCGA data
2.4 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
247
Views
Comment:
C: For Generating PPI
2.4 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
456
Views
Comment:
C: Low mapping percentage with TopHat
2.4 years ago
Martombo
♦ 2.4k
4
Votes
1
Reply
556
Views
Comment:
C: unable to count reads that are aligned to coding region
2.4 years ago
Martombo
♦ 2.4k
1
Vote
0
Replies
1.4k
Views
Comment:
C: GSEA on single-cell cluster data
2.4 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
314
Views
Comment:
C: RSEM tool installation error
2.4 years ago
Martombo
♦ 2.4k
2
Votes
1
Reply
532
Views
Comment:
C: Advice on running a differential expression analysis on patients with slightly d
2.4 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
511
Views
Comment:
C: Tophat2 or STAR for IsoformSwitchAnalyzeR analysis
2.4 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
511
Views
Comment:
C: Tophat2 or STAR for IsoformSwitchAnalyzeR analysis
2.4 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
568
Views
Comment:
C: RNA-seq analysis of two species
2.4 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
739
Views
Comment:
C: STAR index doesn't finish
2.5 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
458
Views
Comment:
C: Performing differential expression study on isoforms
2.5 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
458
Views
Comment:
C: Performing differential expression study on isoforms
2.5 years ago
Martombo
♦ 2.4k
1
Vote
0
Replies
424
Views
Answer:
A: The tools to plot the saturation curve for RNA-Seq
2.5 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
352
Views
Comment:
C: Selecting the consensus/overlapped genes from the DE study
2.5 years ago
Martombo
♦ 2.4k
1
Vote
0
Replies
744
Views
Comment:
C: Is it possible to analyze differentially expressed genes without sample replicat
2.5 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
1.9k
Views
Comment:
C: Biological variation within replicate groups, not much DE
5.0 years ago
Martombo
♦ 2.4k
• updated 2.5 years ago
RamRS
21k
1
Vote
0
Replies
296
Views
Comment:
C: GO Enrichment for non model orlganisms
2.5 years ago
Martombo
♦ 2.4k
1
Vote
0
Replies
1.7k
Views
Comment:
C: how to calculate the log FC for -1.5 fold change?
2.6 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
466
Views
Comment:
C: How to run Py-script 300 times with 3 new variables and a new output-file each t
2.7 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
1.6k
Views
Comment:
C: RNA-Seq counts for all genes?
2.7 years ago
Martombo
♦ 2.4k
3
Votes
0
Replies
372
Views
Comment:
C: Bioinformatics project manager for NGS center
2.7 years ago
Martombo
♦ 2.4k
2
Votes
2
Replies
571
Views
Answer:
C: Percentage of RNA-seq reads in exonic, intronic, intergenic and splice junction
2.7 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
289
Views
Answer:
A: Mutation in one gene in TCGA data
2.8 years ago
Martombo
♦ 2.4k
0
Votes
1
Reply
1.1k
Views
Comment:
C: Gene Co-expression analysis with less number of replicates
2.8 years ago
Martombo
♦ 2.4k
1
Vote
0
Replies
826
Views
Comment:
C: Why DE genes are not among highly variable genes between groups
2.8 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
654
Views
Comment:
C: Selection of hub gene on the basis of node degree
2.9 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
1.8k
Views
Comment:
C: Normalization and differential analysis in ATAC-seq data
2.9 years ago
Martombo
♦ 2.4k
0
Votes
0
Replies
546
Views
Comment:
C: project of MutsigCV/ MuSic
2.9 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
546
Views
Answer:
A: project of MutsigCV/ MuSic
2.9 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
540
Views
Comment:
C: pythonic equivalent to reduce() in R GRanges - how to collapse ranged data?
3.0 years ago
Martombo
♦ 2.4k
1
Vote
1
Reply
421
Views
Answer:
A: Identifying enriched pathways that overlap among a range of databases
3.0 years ago
Martombo
♦ 2.4k
288 results • Page
1 of 6
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.3