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157
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Comment: Comment: Could you please assist in identifying this cluster?
11 hours ago by ATpoint 81k
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5.1k
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Comment: Comment: Memory usage of picard Samsort
12 hours ago by ATpoint 81k
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229
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Answer: Answer: DEseq2
1 day ago by ATpoint 81k
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391
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Comment: Comment: Integration of transcriptomics and proteomics: difficult matching names
3 days ago by ATpoint 81k
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246
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Comment: Comment: Bwa sampe - BGI
3 days ago by ATpoint 81k
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316
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Comment: Comment: Ensembl gene id conversion
3 days ago by ATpoint 81k
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348
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Answer: Answer: Which experiments generate Position Frequency Matrix?
3 days ago by ATpoint 81k
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230
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Comment: Comment: Statistical Advice Needed for RNAseq Data Analysis
3 days ago by ATpoint 81k
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240
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Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
3 days ago by ATpoint 81k
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197
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Comment: Comment: Error in edgeR/Deseq2 Analysis
3 days ago by ATpoint 81k
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364
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Answer: Answer: I am new to single cell analysis. Can RNA velocity (spliced/unspliced) be calcul
3 days ago by ATpoint 81k
3
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2
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259
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Answer: Answer: I'm new to cell ranger. Can single cells prepared with a protocol other than the
3 days ago by ATpoint 81k
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348
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Comment: Comment: Deseq2 : Paired analysis or otherwise
4 days ago by ATpoint 81k
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1
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23k
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Comment: Comment: Gene Set Enrichment Analysis
5 days ago by ATpoint 81k
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348
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Answer: Answer: Deseq2 : Paired analysis or otherwise
6 days ago by ATpoint 81k
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299
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
6 days ago by ATpoint 81k
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247
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Answer: Answer: How to handle more than 1 SRA Run per Experiment?
6 days ago by ATpoint 81k
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265
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
8 days ago by ATpoint 81k
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1
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294
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Comment: Comment: Questions about transfering wgs file to reference genome file
8 days ago by ATpoint 81k
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781
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Comment: Comment: RNAseq of primary tumor and metastases in two different organ
8 days ago by ATpoint 81k
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294
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Comment: Comment: Questions about transfering wgs file to reference genome file
8 days ago by ATpoint 81k
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2.3k
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Comment: Comment: Shannon vs Simpson for TCR diversity estimation
8 days ago by ATpoint 81k
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1
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299
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
8 days ago by ATpoint 81k
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159
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Answer: Answer: Shared pathways up in disease blood and tissue relative to healthy blood (scRNA-
9 days ago by ATpoint 81k
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1
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1.1k
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Comment: Comment: ¿How I know if it is a batch effect or are real differences between my controls
13 days ago by ATpoint 81k
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362
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Comment: Comment: lncRNA from TCGA
13 days ago by ATpoint 81k
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1
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342
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Comment: Comment: WGCNA website
13 days ago by ATpoint 81k
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0
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206
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Comment: Comment: TMM normalization with DESeq2
17 days ago by ATpoint 81k
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1
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206
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Answer: Answer: TMM normalization with DESeq2
updated 17 days ago by 43k • written 17 days ago by 81k
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165
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Comment: Comment: Batch effect issue in RNA velocity analysis
17 days ago by ATpoint 81k
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1
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335
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Comment: Comment: Single cell analysis with "meta".tsv.gz file
17 days ago by ATpoint 81k
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0
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358
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Comment: Comment: Homer giving troubles
17 days ago by ATpoint 81k
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2
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247
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Comment: Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
17 days ago by ATpoint 81k
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250
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Comment: Comment: can't download and use mageck-vispr for R?
17 days ago by ATpoint 81k
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0
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166
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Answer: Answer: Can't download txdbmaker package
17 days ago by ATpoint 81k
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0
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439
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Comment: Comment: Installing Cell Ranger
18 days ago by ATpoint 81k
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236
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Comment: Comment: What are crucial apps/ scripts for cancer genome/data analysis that can be set
18 days ago by ATpoint 81k
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1
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270
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Comment: Comment: Removing batch effect using combat-seq
18 days ago by ATpoint 81k
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1
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439
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Comment: Comment: Installing Cell Ranger
18 days ago by ATpoint 81k
1
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1
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270
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Comment: Comment: Removing batch effect using combat-seq
18 days ago by ATpoint 81k
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1
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358
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Answer: Answer: Homer giving troubles
19 days ago by ATpoint 81k
4
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0
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291
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Answer: Answer: Seeking Proper Interpretation of Dispersion Graph: A Call for Statistical and Bi
20 days ago by ATpoint 81k
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0
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399
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Comment: Comment: Problem generating paired end reads when converting Cell Ranger's BAM result to
21 days ago by ATpoint 81k
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0
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250
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Answer: Answer: How to calculate depth of coverage and applying read depth filter
21 days ago by ATpoint 81k
2
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1
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399
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Answer: Answer: Problem generating paired end reads when converting Cell Ranger's BAM result to
21 days ago by ATpoint 81k
3
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1
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230
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Comment: Comment: Gene reads all zero for each sample
22 days ago by ATpoint 81k
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0
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201
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Comment: Comment: Flow Cytometry Data Analysis by Seurat
22 days ago by ATpoint 81k
3
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1
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304
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Comment: Comment: Volcano Plot Output Inquiry: Graphs Facing Down
22 days ago by ATpoint 81k
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1
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11k
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Comment: Comment: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
22 days ago by ATpoint 81k
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1
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577
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Comment: Comment: Piping samtools to R
23 days ago by ATpoint 81k
9,648 results • Page 1 of 193
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