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1
vote
0
replies
567
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Comment:
Comment: Merge overlapping paired end reads from BAM file.
3 months ago by
liorglic
★ 1.3k
0
votes
0
replies
570
views
Comment:
Comment: What's the acceptable threshold in Quality Assessment for Genome Assemblies?
3 months ago by
liorglic
★ 1.3k
1
vote
0
replies
666
views
Comment:
Comment: Renaming fasta files with their headers
3 months ago by
liorglic
★ 1.3k
1
vote
1
reply
1.0k
views
Comment:
Comment: How to speed-up to contruct phylogenetic tree
3 months ago by
liorglic
★ 1.3k
0
votes
1
reply
666
views
Answer:
Answer: Renaming fasta files with their headers
3 months ago by
liorglic
★ 1.3k
2
votes
1
reply
570
views
Answer:
Answer: What's the acceptable threshold in Quality Assessment for Genome Assemblies?
3 months ago by
liorglic
★ 1.3k
0
votes
0
replies
439
views
Comment:
Comment: Illumina versus Oxford Nanopore Technologies BUSCO Scores
4 months ago by
liorglic
★ 1.3k
2
votes
4
replies
831
views
Repeat detection/masking in bacteria
annotation
repeat-masking
updated 5 months ago by
Max Sikolenko
• 0 • written 8 months ago by
liorglic
★ 1.3k
1
vote
1
reply
671
views
Comment:
Comment: Why 99% at 20X for sequencing?
5 months ago by
liorglic
★ 1.3k
1
vote
0
replies
923
views
Comment:
Comment: How to align multiple Sequences with one reference sequence?
5 months ago by
liorglic
★ 1.3k
2
votes
1
reply
447
views
Answer:
Answer: Get support value of MRCA given a list of tip.label in R newick trees
6 months ago by
liorglic
★ 1.3k
0
votes
1
reply
702
views
Comment:
Comment: Bacterial Pangenome Analysis
6 months ago by
liorglic
★ 1.3k
0
votes
1
reply
702
views
Comment:
Comment: Bacterial Pangenome Analysis
6 months ago by
liorglic
★ 1.3k
0
votes
1
reply
702
views
Answer:
Answer: Bacterial Pangenome Analysis
6 months ago by
liorglic
★ 1.3k
0
votes
0
replies
754
views
Comment:
Comment: High classification percentage on Kraken2?
7 months ago by
liorglic
★ 1.3k
0
votes
0
replies
998
views
Answer:
Answer: What is the common practice to view WGS data on IGV?
7 months ago by
liorglic
★ 1.3k
0
votes
1
reply
754
views
Comment:
Comment: High classification percentage on Kraken2?
7 months ago by
liorglic
★ 1.3k
1
vote
1
reply
710
views
Comment:
Comment: Computing pairwise AA global sequence alignment between all pairs in a vector of
7 months ago by
liorglic
★ 1.3k
1
vote
1
reply
710
views
Comment:
Comment: Computing pairwise AA global sequence alignment between all pairs in a vector of
7 months ago by
liorglic
★ 1.3k
1
vote
2
replies
510
views
Differential gene expression with specif genes of interest
RNA-seq
DGE
updated 7 months ago by
Zhenyu Zhang
★ 1.1k • written 7 months ago by
liorglic
★ 1.3k
1
vote
0
replies
809
views
Comment:
Comment: How to find the coverage of the assembled contigs of the PacBio long reads?
7 months ago by
liorglic
★ 1.3k
1
vote
1
reply
1.3k
views
Answer:
Answer: Filtering parasite reads from host reads
7 months ago by
liorglic
★ 1.3k
1
vote
1
reply
809
views
Answer:
Answer: How to find the coverage of the assembled contigs of the PacBio long reads?
7 months ago by
liorglic
★ 1.3k
0
votes
0
replies
831
views
Comment:
Comment: Repeat detection/masking in bacteria
8 months ago by
liorglic
★ 1.3k
3
votes
2
replies
717
views
High-resolution annotation of LTR elements
LTR
updated 13 months ago by
colindaven
6.3k • written 13 months ago by
liorglic
★ 1.3k
0
votes
0
replies
717
views
Answer:
Answer: High-resolution annotation of LTR elements
13 months ago by
liorglic
★ 1.3k
0
votes
0
replies
1.4k
views
Comment:
Comment: Repeat masking for genome annotation
13 months ago by
liorglic
★ 1.3k
0
votes
1
reply
1.4k
views
Comment:
Comment: Repeat masking for genome annotation
13 months ago by
liorglic
★ 1.3k
1
vote
4
replies
1.4k
views
Repeat masking for genome annotation
masking
annotation
repeat
13 months ago by
liorglic
★ 1.3k
0
votes
0
replies
1.6k
views
Comment:
Comment: How to unzip a file with .bgz extention
13 months ago by
liorglic
★ 1.3k
0
votes
0
replies
364
views
Statistical test on two phylogenetically remote groups
phylogeny
ANOVA
13 months ago by
liorglic
★ 1.3k
1
vote
0
replies
5.8k
views
Comment:
Comment: Repeat masked gtf files from ensembl
14 months ago by
liorglic
★ 1.3k
0
votes
1
reply
767
views
Answer:
Answer: Is there a way to test or say if one gene signature is better than another for p
14 months ago by
liorglic
★ 1.3k
2
votes
0
replies
834
views
Answer:
Answer: Paired - end sequencing
14 months ago by
liorglic
★ 1.3k
0
votes
0
replies
1.1k
views
Comment:
Comment: Percentage of exons, introns and intergenic regions
14 months ago by
liorglic
★ 1.3k
1
vote
1
reply
679
views
Answer:
Answer: Q matrix for phylogenetic tree reconstruction [PhyMl]
15 months ago by
liorglic
★ 1.3k
2
votes
2
replies
974
views
Classifying repeat features from Ensembl
ensembl
repeat
15 months ago by
liorglic
★ 1.3k
1
vote
0
replies
974
views
Answer:
Answer: Classifying repeat features from Ensembl
15 months ago by
liorglic
★ 1.3k
1
vote
1
reply
1.9k
views
Comment:
Comment: analyzing a read mapped file with python
15 months ago by
liorglic
★ 1.3k
1
vote
0
replies
779
views
Comment:
Comment: Is Maximum likelihood estimated parameters used only for dataset preparation, wh
15 months ago by
liorglic
★ 1.3k
0
votes
0
replies
1.8k
views
Comment:
Comment: How do I find insertions with BEDTools?
15 months ago by
liorglic
★ 1.3k
0
votes
0
replies
695
views
Answer:
Answer: How to extract repeat element coordinates from an Ensembl genome?
updated 15 months ago by
Ram
43k • written 15 months ago by
liorglic
★ 1.3k
0
votes
1
reply
634
views
Comment:
Comment: Transposon_ annotation
15 months ago by
liorglic
★ 1.3k
0
votes
0
replies
851
views
Comment:
Comment: unique k-mers
15 months ago by
liorglic
★ 1.3k
0
votes
1
reply
5.8k
views
Comment:
Comment: Repeat masked gtf files from ensembl
15 months ago by
liorglic
★ 1.3k
3
votes
1
reply
528
views
Quickly examining many MSAs
MSA
updated 16 months ago by
Dave Carlson
★ 1.7k • written 16 months ago by
liorglic
★ 1.3k
0
votes
0
replies
1.0k
views
Comment:
Comment: Reciprocal (Multiple-way) Best BLAST Hits
16 months ago by
liorglic
★ 1.3k
0
votes
1
reply
1.0k
views
Comment:
Comment: Multiple-way Reciprocal Best BLAST Hits
16 months ago by
liorglic
★ 1.3k
0
votes
0
replies
1.2k
views
Comment:
Comment: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
16 months ago by
liorglic
★ 1.3k
0
votes
0
replies
1.2k
views
Comment:
Comment: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
16 months ago by
liorglic
★ 1.3k
276 results • Page
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