Biostars beta testing.
Sinji ♦ 2.8k
Status: New
Handle: @Sinji24176
Reputation: 2810
Email: c********@ucsd.edu
Joined: 8 months ago
Last seen: 2.1 years ago
Location: UT Southwestern Medical Center

I am a research assistant at the University of Texas Southwestern Medical Center that only recently began working in computational biology. Most of my work involves the analysis of sequencing data such as ChIP-seq, RNA-seq, and MNase-seq and its visualization. 

Comment: C: stringtie cannot recognize Gencode GTF
1 Vote | 1 Reply
2.1 years ago
Sinji
♦ 2.8k
Comment: C: bedops -u does not work properly
2 Votes | 0 Replies
2.1 years ago
Sinji
♦ 2.8k
Comment: C: bedops -u does not work properly
0 Votes | 1 Reply
2.1 years ago
Sinji
♦ 2.8k
Comment: C: bedops -u does not work properly
0 Votes | 1 Reply
2.1 years ago
Sinji
♦ 2.8k
Answer: A: Detect LINE1 element in NGS data
0 Votes | 0 Replies
2.2 years ago
Sinji
♦ 2.8k
Comment: C: nextflow implementation of grape pipeline
1 Vote | 1 Reply
2.2 years ago
Sinji
♦ 2.8k
Comment: C: How Gro-seq identify enhancer RNA?
1 Vote | 2 Replies
2.2 years ago
Sinji
♦ 2.8k
Trim galore terminates with exit signal: '256'
3 Votes | 6 Replies
3.7 years ago
Sinji
♦ 2.8k
• updated 2.2 years ago
ZheFrench
• 220
ChromHMM Output Descriptions
4 Votes | 6 Replies
3.5 years ago
Sinji
♦ 2.8k
• updated 2.2 years ago
Roman Hillje
• 30
Comment: C: Identifying the orientation of a CTCF motif?
0 Votes | 0 Replies
2.3 years ago
Sinji
♦ 2.8k
Identifying the orientation of a CTCF motif?
4 Votes | 2 Replies
2.3 years ago
Sinji
♦ 2.8k
• updated 2.3 years ago
simon.vanheeringen
• 170
Answer: A: Snakemake vs. Nextflow: strengths and weaknesses
5 Votes | 2 Replies
2.7 years ago
Sinji
♦ 2.8k
Comment: C: Chip-seq peak annotation [Chipseeker]
2 Votes | 0 Replies
2.7 years ago
Sinji
♦ 2.8k
Comment: C: STAR installation make error
1 Vote | 1 Reply
2.7 years ago
Sinji
♦ 2.8k
Answer: A: Peak ident near highly expressed genes
1 Vote | 0 Replies
2.7 years ago
Sinji
♦ 2.8k
Answer: A: chip-seq analysis and peak annotation
0 Votes | 0 Replies
2.7 years ago
Sinji
♦ 2.8k
Comment: C: Is annotation of enhancers to nearest gene pointless?
3 Votes | 1 Reply
2.7 years ago
Sinji
♦ 2.8k
Answer: A: Is annotation of enhancers to nearest gene pointless?
6 Votes | 1 Reply
2.7 years ago
Sinji
♦ 2.8k
Comment: C: BBMap: Number of reads out does not add up to number of reads in
0 Votes | 0 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: error in macs2 usage
0 Votes | 0 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: EP300 ChIP-seq in the brain
0 Votes | 1 Reply
2.8 years ago
Sinji
♦ 2.8k
Comment: C: Long Motif Predicted by MEME SUITE
0 Votes | 1 Reply
2.8 years ago
Sinji
♦ 2.8k
Comment: C: Long Motif Predicted by MEME SUITE
1 Vote | 1 Reply
2.8 years ago
Sinji
♦ 2.8k
Answer: A: Does BBMap not include headers in BAM files?
1 Vote | 0 Replies
2.8 years ago
Sinji
♦ 2.8k
Does BBMap not include headers in BAM files?
3 Votes | 7 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: Does BBMap not include headers in BAM files?
0 Votes | 0 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: Does BBMap not include headers in BAM files?
0 Votes | 0 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: Does BBMap not include headers in BAM files?
0 Votes | 1 Reply
2.8 years ago
Sinji
♦ 2.8k
Comment: C: StackExchange/Area51 bioinformatics is back
5 Votes | 2 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: StackExchange/Area51 bioinformatics is back
1 Vote | 0 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: SatckExchage/Area51 bioinformatics is back
13 Votes | 3 Replies
2.8 years ago
Sinji
♦ 2.8k
Comment: C: bedtools_intersect files sorting problem
0 Votes | 1 Reply
2.8 years ago
Sinji
♦ 2.8k
Comment: C: bedtools_intersect files sorting problem
0 Votes | 1 Reply
2.8 years ago
Sinji
♦ 2.8k
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