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0
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0
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206
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Comment:
Comment: How to detect and visualize ORFs in bacterial genome?
5 days ago by
marongiu.luigi
▴ 710
0
votes
2
replies
206
views
How to detect and visualize ORFs in bacterial genome?
statistics
visualization
ORFs
genome
5 days ago by
marongiu.luigi
▴ 710
0
votes
0
replies
434
views
Comment:
Comment: Error in running Mauve alignner in Ubuntu 20.04
8 days ago by
marongiu.luigi
▴ 710
0
votes
0
replies
474
views
Comment:
Comment: How to assure that sequence consensus is genuine?
11 days ago by
marongiu.luigi
▴ 710
0
votes
1
reply
434
views
Comment:
Comment: Error in running Mauve alignner in Ubuntu 20.04
11 days ago by
marongiu.luigi
▴ 710
0
votes
1
reply
434
views
Comment:
Comment: Error in running Mauve alignner in Ubuntu 20.04
11 days ago by
marongiu.luigi
▴ 710
0
votes
6
replies
434
views
Error in running Mauve alignner in Ubuntu 20.04
java
linux
aligner
mauve
8 days ago by
marongiu.luigi
▴ 710
0
votes
1
reply
474
views
Comment:
Comment: How to assure that sequence consensus is genuine?
14 days ago by
marongiu.luigi
▴ 710
3
votes
3
replies
508
views
How to run BRIG on Ubuntu 22?
BRIG
Ubuntu
updated 14 days ago by
Reno
• 0 • written 3 months ago by
marongiu.luigi
▴ 710
0
votes
5
replies
474
views
How to assure that sequence consensus is genuine?
genome
11 days ago by
marongiu.luigi
▴ 710
0
votes
0
replies
142
views
How to generate a comparative map using CGview?
genome
map
CGView
4 weeks ago by
marongiu.luigi
▴ 710
2
votes
6
replies
531
views
How to visualize multiple bacterial genomes with circos?
atlas
genome
visualization
updated 12 weeks ago by
mathavanbioinfo
▴ 80 • written 12 weeks ago by
marongiu.luigi
▴ 710
0
votes
1
reply
531
views
Comment:
Comment: How to visualize multiple bacterial genomes with circos?
12 weeks ago by
marongiu.luigi
▴ 710
3
votes
2
replies
278
views
Alternatives to Mummer3 for linux?
alignmemt
sequences
aligner
updated 12 weeks ago by
Dave Carlson
★ 1.7k • written 12 weeks ago by
marongiu.luigi
▴ 710
0
votes
1
reply
253
views
How to annotate phage genomes?
genome
phage
annotation
updated 3 months ago by
Ram
43k • written 3 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
508
views
Comment:
Comment: How to run BRIG on Ubuntu 22?
3 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
267
views
Comment:
Comment: How to add flags to callvariants.sh?
3 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
499
views
Comment:
Comment: How to draw genome atlas on Linux?
3 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
499
views
Comment:
Comment: How to draw genome atlas on Linux?
3 months ago by
marongiu.luigi
▴ 710
1
vote
7
replies
499
views
How to draw genome atlas on Linux?
atlas
genome
visualization
3 months ago by
marongiu.luigi
▴ 710
1
vote
2
replies
267
views
How to add flags to callvariants.sh?
callvariants.sh
bbtools
3 months ago by
marongiu.luigi
▴ 710
0
votes
2
replies
417
views
How to launch MAUVE on Ubuntu 22?
mauve
ubuntu
aligner
updated 3 months ago by
brian.fristensky
▴ 460 • written 3 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
175
views
How to make block alignment graph with PROGRESSIVE-MAUVE?
mauve
ubuntu
aligner
3 months ago by
marongiu.luigi
▴ 710
0
votes
1
reply
981
views
Comment:
Comment: Aligner with statistics included?
3 months ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.4k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
3 months ago by
marongiu.luigi
▴ 710
0
votes
2
replies
981
views
Comment:
Comment: Aligner with statistics included?
5 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
981
views
Comment:
Comment: Aligner with statistics included?
5 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
981
views
Comment:
Comment: Aligner with statistics included?
5 months ago by
marongiu.luigi
▴ 710
5
votes
12
replies
1.4k
views
What is the correct procedure to generate a consensus bacterial sequence?
consensus
samtools
illumina
fastq
updated 3 months ago by
Brian Bushnell
20k • written 6 months ago by
marongiu.luigi
▴ 710
2
votes
9
replies
981
views
Aligner with statistics included?
aligner
alignment
updated 3 months ago by
Brian Bushnell
20k • written 6 months ago by
marongiu.luigi
▴ 710
1
vote
2
replies
574
views
How to properly run prokka on Ubuntu 22?
ubuntu
prokka
updated 6 months ago by
Ram
43k • written 6 months ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.4k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
6 months ago by
marongiu.luigi
▴ 710
1
vote
1
reply
345
views
Clustal omega does not align: Killedssive alignment output
sequence-alignment
clustal
updated 6 months ago by
Ram
43k • written 6 months ago by
marongiu.luigi
▴ 710
0
votes
2
replies
1.4k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
6 months ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.4k
views
Comment:
Comment: What is the correct procedure to generate a consensus bacterial sequence?
6 months ago by
marongiu.luigi
▴ 710
0
votes
1
reply
382
views
How to generate a consensus sequence from BAM file with bcftools?
bam
bcftools
consensus
updated 7 months ago by
GenoMax
141k • written 7 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
272
views
How to assemble bacterial genomes accounting for plasmids?
genome
assembly
bacteria
7 months ago by
marongiu.luigi
▴ 710
0
votes
0
replies
1.4k
views
Comment:
Comment: How reliable are WGS results?
19 months ago by
marongiu.luigi
▴ 710
6
votes
10
replies
1.4k
views
How reliable are WGS results?
WGS
accuracy
quality
reliability
control
19 months ago by
marongiu.luigi
▴ 710
2
votes
9
replies
2.4k
views
Reality check for consensus fasta generated with bcftools
reference-genome
bcftools
assembly
fasta
updated 2.3 years ago by
Ram
43k • written 2.3 years ago by
marongiu.luigi
▴ 710
0
votes
2
replies
2.4k
views
Comment:
Comment: Reality check for consensus fasta generated with bcftools
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
0
replies
814
views
How to use PhageTerm?
genome
assembly
PhageTerm
phage
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.3k
views
Comment:
Comment: What is the procedure for the assembly of bacteriophage genomes?
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
1
reply
2.4k
views
Comment:
Comment: Reality check for consensus fasta generated with bcftools
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
0
replies
1.6k
views
Comment:
Comment: How to collapse de novo contigs into a single sequence?
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.6k
views
Comment:
Comment: How to collapse de novo contigs into a single sequence?
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.6k
views
Comment:
Comment: How to collapse de novo contigs into a single sequence?
2.3 years ago by
marongiu.luigi
▴ 710
3
votes
6
replies
1.6k
views
How to collapse de novo contigs into a single sequence?
genome
de
contigs
assembly
spades
bruijn
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.3k
views
Comment:
Comment: What is the procedure for the assembly of bacteriophage genomes?
2.3 years ago by
marongiu.luigi
▴ 710
0
votes
1
reply
1.3k
views
Comment:
Comment: What is the procedure for the assembly of bacteriophage genomes?
2.3 years ago by
marongiu.luigi
▴ 710
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