ALchEmiXt ♦ 1.9k
Status: New
Handle: @ALchEmiXt2147
Reputation: 1870
Email: a******@wur.nl
Joined: 7 months ago
Twitter: a_bossers
Google Scholar: 5W_qAaAAAAAJ
Last seen: 22 months ago
Location: The Netherlands

Working mainly on multi-Omics approaches using all kinds of OMICS tools, metagenomics, meta-transcriptomics, NGS and bioinformatics.
Linux enthousiast. Preferred languages/platforms: Perl, R, PHP, BASH, Ubuntu, galaxy
Occasionally you can find me on Twitter as well.
CU,
Alex

Posts Awards
11
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13
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3.6k
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Average coverage of de novo SPAdes assembly deviates a lot from theretical coverage
11 Votes | 13 Replies
4.3 years ago
ALchEmiXt ♦ 1.9k
1
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0
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772
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Answer: A: Can we assembly the draft sequences that is assembled by another genome assemble
1 Vote | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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0
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672
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Answer: A: phylip format from Mummer
0 Votes | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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659
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Comment: C: How to calculate the mass of whole protiens and sub regions?
0 Votes | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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1
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971
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Answer: A: Metagenome/metatranscriptome db with blast option?
0 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
2
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649
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Comment: C: How can a MSA be useful for sub-cellular location identification?
2 Votes | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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1
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649
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Answer: A: How can a MSA be useful for sub-cellular location identification?
0 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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1.0k
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Comment: C: localhost doesn't work
0 Votes | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
1
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1
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1.0k
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Answer: A: localhost doesn't work
1 Vote | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
1
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1.0k
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Answer: A: Pairwise sequence alignment
1 Vote | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
1
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477
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Answer: A: Data bases with proteins and ligands
1 Vote | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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1
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712
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Comment: C: result of cd hit est 2d meaning
0 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
4
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1
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712
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Answer: A: result of cd hit est 2d meaning
4 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
3
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1.3k
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Comment: C: Add sequence lengths to headers in a fasta file
3 Votes | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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1
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1.7k
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Comment: C: Converting Uniprot File to a Fasta File in Perl
0 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
1
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0
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1.7k
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Comment: C: Converting Uniprot File to a Fasta File in Perl
1 Vote | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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1
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1.2k
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Comment: C: dedupe from BBMAP suite woes with memory and stdout
0 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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1
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1.2k
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Comment: C: dedupe from BBMAP suite woes with memory and stdout
0 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
4
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9
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1.2k
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dedupe from BBMAP suite woes with memory and stdout
4 Votes | 9 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
3
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1
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1.7k
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Answer: A: Converting Uniprot File to a Fasta File in Perl
3 Votes | 1 Reply
2.9 years ago
ALchEmiXt ♦ 1.9k
0
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0
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2.8k
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Comment: C: NCBI: batch upload WGS sequences linked to bioproject/biosample
0 Votes | 0 Replies
2.9 years ago
ALchEmiXt ♦ 1.9k
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1.4k
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Comment: C: samtools mpileup not calling small (6 base) INSERT
0 Votes | 0 Replies
3.3 years ago
ALchEmiXt ♦ 1.9k
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1.4k
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Comment: C: samtools mpileup not calling small (6 base) INSERT
0 Votes | 0 Replies
3.3 years ago
ALchEmiXt ♦ 1.9k
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5
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1.4k
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samtools mpileup not calling small (6 base) INSERT
0 Votes | 5 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
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2.5k
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Comment: C: How can I run All-v-all BLAST
0 Votes | 0 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
2
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1
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2.5k
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Answer: A: How can I run All-v-all BLAST
2 Votes | 1 Reply
3.6 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.4k
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Comment: C: samtools mpileup not calling small (6 base) INSERT
0 Votes | 0 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
16
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7
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3.6k
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Identification Of Significant Differences Between Phylogentic Trees Using Distance Matrix
16 Votes | 7 Replies
7.1 years ago
ALchEmiXt ♦ 1.9k
0
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1.4k
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Comment: C: Percentage of similarity between two contigs files
0 Votes | 0 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
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1.8k
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Comment: C: Remove duplicate protein sequences having different fasta identifiers
0 Votes | 0 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
0
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0
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986
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Answer: A: how to find motif across few protein sequences ?
0 Votes | 0 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
0
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662
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Answer: A: identify-predict peptides targeted by antibody
0 Votes | 0 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
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1.3k
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Answer: A: SNP calling for correcting errors ?
0 Votes | 0 Replies
3.6 years ago
ALchEmiXt ♦ 1.9k
0
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781
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Answer: A: Automate peptide lookup / matching in human plasma proteome (http://www.peptidea
0 Votes | 0 Replies
4.0 years ago
ALchEmiXt ♦ 1.9k
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1.3k
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Answer: A: Is there any journal where you can post small programs to solve very specific ta
0 Votes | 0 Replies
4.0 years ago
ALchEmiXt ♦ 1.9k
1
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1
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1.4k
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Answer: A: Percentage of similarity between two contigs files
1 Vote | 1 Reply
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.6k
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Answer: A: single copy genes for phylogenetic tree after orthomcl tool
0 Votes | 0 Replies
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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1.4k
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Comment: C: No one knows how to get single copy orthologs from orthomcl output?
0 Votes | 0 Replies
4.0 years ago
ALchEmiXt ♦ 1.9k
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1.5k
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Answer: A: Speeding up NUCmer for de novo contig to reference alignment
0 Votes | 0 Replies
4.0 years ago
ALchEmiXt ♦ 1.9k
2
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2
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3.6k
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Answer: A: Average coverage of de novo SPAdes assembly deviates a lot from theretical cover
2 Votes | 2 Replies
4.2 years ago
ALchEmiXt ♦ 1.9k
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