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ALchEmiXt ♦ 1.9k
Status: New
Handle: @ALchEmiXt2147
Reputation: 1870
Joined: 20 months ago
Twitter: a_bossers
Google Scholar: 5W_qAaAAAAAJ
Last seen: 3.0 years ago
Location: The Netherlands

Working mainly on multi-Omics approaches using all kinds of OMICS tools, metagenomics, meta-transcriptomics, NGS and bioinformatics.
Linux enthousiast. Preferred languages/platforms: Perl, R, PHP, BASH, Ubuntu, galaxy
Occasionally you can find me on Twitter as well.
CU,
Alex

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11
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13
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3.6k
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Average coverage of de novo SPAdes assembly deviates a lot from theretical coverage
SPAdes Assembly de novo bacterial species
5.4 years ago
ALchEmiXt ♦ 1.9k • updated 2.7 years ago
Biostar 20
1
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0
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781
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Answer: A: Can we assembly the draft sequences that is assembled by another genome assemble
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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687
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Answer: A: phylip format from Mummer
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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672
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Comment: C: How to calculate the mass of whole protiens and sub regions?
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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1
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979
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Answer: A: Metagenome/metatranscriptome db with blast option?
4.0 years ago
ALchEmiXt ♦ 1.9k
2
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0
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660
Views
Comment: C: How can a MSA be useful for sub-cellular location identification?
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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1
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660
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Answer: A: How can a MSA be useful for sub-cellular location identification?
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.0k
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Comment: C: localhost doesn't work
4.0 years ago
ALchEmiXt ♦ 1.9k
1
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1
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1.0k
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Answer: A: localhost doesn't work
4.0 years ago
ALchEmiXt ♦ 1.9k
1
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0
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1.0k
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Answer: A: Pairwise sequence alignment
4.0 years ago
ALchEmiXt ♦ 1.9k
1
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0
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487
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Answer: A: Data bases with proteins and ligands
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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1
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728
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Comment: C: result of cd hit est 2d meaning
4.0 years ago
ALchEmiXt ♦ 1.9k
4
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1
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728
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Answer: A: result of cd hit est 2d meaning
4.0 years ago
ALchEmiXt ♦ 1.9k
3
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0
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1.3k
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Comment: C: Add sequence lengths to headers in a fasta file
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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1
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1.7k
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Comment: C: Converting Uniprot File to a Fasta File in Perl
4.0 years ago
ALchEmiXt ♦ 1.9k
1
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0
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1.7k
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Comment: C: Converting Uniprot File to a Fasta File in Perl
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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1
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1.2k
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Comment: C: dedupe from BBMAP suite woes with memory and stdout
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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1
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1.2k
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Comment: C: dedupe from BBMAP suite woes with memory and stdout
4.0 years ago
ALchEmiXt ♦ 1.9k
4
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9
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1.2k
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dedupe from BBMAP suite woes with memory and stdout
bbmap dedupe linux duplicates fastq
4.0 years ago
ALchEmiXt ♦ 1.9k • updated 4.0 years ago
Brian Bushnell 16k
3
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1
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1.7k
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Answer: A: Converting Uniprot File to a Fasta File in Perl
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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2.9k
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Comment: C: NCBI: batch upload WGS sequences linked to bioproject/biosample
4.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.4k
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Comment: C: samtools mpileup not calling small (6 base) INSERT
4.4 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.4k
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Comment: C: samtools mpileup not calling small (6 base) INSERT
4.4 years ago
ALchEmiXt ♦ 1.9k
0
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5
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1.4k
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samtools mpileup not calling small (6 base) INSERT
samtools mpileup INDEL prokaryote vcf
4.7 years ago
ALchEmiXt ♦ 1.9k • updated 4.5 years ago
sb1 • 0
0
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0
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2.6k
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Comment: C: How can I run All-v-all BLAST
4.7 years ago
ALchEmiXt ♦ 1.9k
2
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1
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2.6k
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Answer: A: How can I run All-v-all BLAST
4.7 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.4k
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Comment: C: samtools mpileup not calling small (6 base) INSERT
4.7 years ago
ALchEmiXt ♦ 1.9k
16
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7
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3.6k
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Identification Of Significant Differences Between Phylogentic Trees Using Distance Matrix
phylogenetics
8.2 years ago
ALchEmiXt ♦ 1.9k • updated 4.7 years ago
Biostar 20
0
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0
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1.4k
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Comment: C: Percentage of similarity between two contigs files
4.7 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.8k
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Comment: C: Remove duplicate protein sequences having different fasta identifiers
4.7 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1000
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Answer: A: how to find motif across few protein sequences ?
4.7 years ago
ALchEmiXt ♦ 1.9k
0
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0
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675
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Answer: A: identify-predict peptides targeted by antibody
4.7 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.3k
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Answer: A: SNP calling for correcting errors ?
4.7 years ago
ALchEmiXt ♦ 1.9k
0
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0
Replies
800
Views
Answer: A: Automate peptide lookup / matching in human plasma proteome (http://www.peptidea
5.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.3k
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Answer: A: Is there any journal where you can post small programs to solve very specific ta
5.0 years ago
ALchEmiXt ♦ 1.9k
1
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1
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1.4k
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Answer: A: Percentage of similarity between two contigs files
5.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.6k
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Answer: A: single copy genes for phylogenetic tree after orthomcl tool
5.0 years ago
ALchEmiXt ♦ 1.9k
0
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0
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1.5k
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Answer: A: Speeding up NUCmer for de novo contig to reference alignment
5.1 years ago
ALchEmiXt ♦ 1.9k
2
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2
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3.6k
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Answer: A: Average coverage of de novo SPAdes assembly deviates a lot from theretical cover
5.3 years ago
ALchEmiXt ♦ 1.9k
0
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0
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3.6k
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Comment: C: Average coverage of de novo SPAdes assembly deviates a lot from theretical cover
5.3 years ago
ALchEmiXt ♦ 1.9k
0
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0
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3.6k
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Comment: C: Average coverage of de novo SPAdes assembly deviates a lot from theretical cover
5.3 years ago
ALchEmiXt ♦ 1.9k
0
Votes
1
Reply
3.6k
Views
Comment: C: Average coverage of de novo SPAdes assembly deviates a lot from theretical cover
5.4 years ago
ALchEmiXt ♦ 1.9k
0
Votes
1
Reply
3.6k
Views
Comment: C: Average coverage of de novo SPAdes assembly deviates a lot from theretical cover
5.4 years ago
ALchEmiXt ♦ 1.9k
0
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0
Replies
1.0k
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Comment: C: Mapping reads on small reference genomes
5.4 years ago
ALchEmiXt ♦ 1.9k
0
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1
Reply
2.9k
Views
Comment: C: NCBI: batch upload WGS sequences linked to bioproject/biosample
6.2 years ago
ALchEmiXt ♦ 1.9k
2
Votes
3
Replies
2.9k
Views
NCBI: batch upload WGS sequences linked to bioproject/biosample
ncbi submission WGS biosample bioproject
6.3 years ago
ALchEmiXt ♦ 1.9k
0
Votes
1
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2.1k
Views
Answer: A: Kmergenie: R script cannot output png files
6.4 years ago
ALchEmiXt ♦ 1.9k
6
Votes
5
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2.6k
Views
Ncbi Genome Sub-Species Trees
genome phylogenetics ncbi
9.2 years ago
ALchEmiXt ♦ 1.9k • updated 6.5 years ago
Biostar 20
0
Votes
1
Reply
8.5k
Views
Comment: C: Software For Analysis Of Bacterial Genomics.
8.1 years ago
ALchEmiXt ♦ 1.9k
2
Votes
1
Reply
8.5k
Views
Answer: A: Software For Analysis Of Bacterial Genomics.
8.1 years ago
ALchEmiXt ♦ 1.9k
215 results • Page 1 of 5
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