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0
votes
0
replies
7.5k
views
Comment:
Comment: Intersect multiple BED files
1 day ago by
Alex Reynolds
35k
0
votes
1
reply
372
views
Comment:
Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
3 days ago by
Alex Reynolds
35k
0
votes
0
replies
253
views
Answer:
Answer: Error occurs when migrate-n software performs "make mpis"
3 days ago by
Alex Reynolds
35k
0
votes
1
reply
372
views
Comment:
Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
4 days ago by
Alex Reynolds
35k
1
vote
1
reply
372
views
Answer:
Answer: Coverage depth map of genome from multiple sample coverage bedgraphs?
4 days ago by
Alex Reynolds
35k
0
votes
0
replies
593
views
Answer:
Answer: Convert Gene symbol to Ensembl ID
16 days ago by
Alex Reynolds
35k
1
vote
0
replies
428
views
Comment:
Comment: Genes with multiple chromosome locations
24 days ago by
Alex Reynolds
35k
0
votes
1
reply
593
views
Comment:
Comment: Convert Gene symbol to Ensembl ID
24 days ago by
Alex Reynolds
35k
0
votes
1
reply
593
views
Comment:
Comment: Convert Gene symbol to Ensembl ID
25 days ago by
Alex Reynolds
35k
0
votes
0
replies
18k
views
Comment:
Comment: BEDOPS gtf2bed conversion error with Ensembl GTF
4 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
402
views
Comment:
Comment: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
5 weeks ago by
Alex Reynolds
35k
2
votes
0
replies
402
views
Answer:
Answer: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
5 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
600
views
Comment:
Comment: Random Access remote BAM files
5 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
600
views
Comment:
Comment: Random Access remote BAM files
5 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
600
views
Comment:
Comment: Random Access remote BAM files
6 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
600
views
Answer:
Answer: Random Access remote BAM files
6 weeks ago by
Alex Reynolds
35k
2
votes
1
reply
402
views
Answer:
Answer: Double counts with bedtools intersect?
10 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
1.2k
views
Comment:
Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
10 weeks ago by
Alex Reynolds
35k
0
votes
1
reply
1.2k
views
Comment:
Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
11 weeks ago by
Alex Reynolds
35k
1
vote
1
reply
1.2k
views
Answer:
Answer: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
11 weeks ago by
Alex Reynolds
35k
0
votes
0
replies
353
views
Answer:
Answer: identify genes
12 weeks ago by
Alex Reynolds
35k
1
vote
2
replies
1.6k
views
Comment:
Comment: PanDepth, an ultra-fast and efficient genomic tool for coverage calculation
3 months ago by
Alex Reynolds
35k
0
votes
0
replies
547
views
Comment:
Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
3 months ago by
Alex Reynolds
35k
0
votes
0
replies
547
views
Comment:
Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
3 months ago by
Alex Reynolds
35k
3
votes
2
replies
547
views
Answer:
Answer: Where can I get a list of SNPs mapping overlapping genes in humans?
3 months ago by
Alex Reynolds
35k
0
votes
1
reply
3.0k
views
Comment:
Comment: Decoding MM and ML tags in .SAM file
4 months ago by
Alex Reynolds
35k
1
vote
0
replies
700
views
Answer:
Answer: Filter a BED file based on genome coordinates for gene names
4 months ago by
Alex Reynolds
35k
1
vote
0
replies
356
views
Answer:
Answer: distance between chip peaks and individual TSS
4 months ago by
Alex Reynolds
35k
0
votes
0
replies
564
views
Answer:
Answer: Simple tools for creation of figures of gene and protein structure
4 months ago by
Alex Reynolds
35k
0
votes
0
replies
479
views
Answer:
Answer: Visualize raw rna fastq file and aligned bam file
5 months ago by
Alex Reynolds
35k
1
vote
1
reply
5.4k
views
Comment:
Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
5 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.1k
views
Comment:
Comment: Getting the overlap between two GTF files
5 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.1k
views
Comment:
Comment: Getting the overlap between two GTF files
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.1k
views
Answer:
Answer: Getting the overlap between two GTF files
6 months ago by
Alex Reynolds
35k
1
vote
1
reply
600
views
Comment:
Comment: Mapping SNP rsIds/ positions to genes coding for proteins
6 months ago by
Alex Reynolds
35k
1
vote
1
reply
600
views
Answer:
Answer: Mapping SNP rsIds/ positions to genes coding for proteins
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
689
views
Answer:
Answer: BED files
6 months ago by
Alex Reynolds
35k
1
vote
1
reply
795
views
Comment:
Comment: Filter human transcription factors
6 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.3k
views
Comment:
Comment: Read block operation failed with BAM file
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
416
views
Answer:
Answer: Visualize where kmers are on a reference genome
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.3k
views
Comment:
Comment: Read block operation failed with BAM file
6 months ago by
Alex Reynolds
35k
2
votes
8
replies
1.3k
views
Read block operation failed with BAM file
bgzip
samtools
bam
pysam
htslib
updated 6 months ago by
John Marshall
3.0k • written 6 months ago by
Alex Reynolds
35k
2
votes
0
replies
703
views
Answer:
Answer: Create 10,000bp windows for a SNP file and assign each SNP to its respective win
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.3k
views
Comment:
Comment: Read block operation failed with BAM file
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.6k
views
Comment:
Comment: bedops alternative for bedtools -unionbedg ?
6 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.6k
views
Comment:
Comment: bedops alternative for bedtools -unionbedg ?
6 months ago by
Alex Reynolds
35k
0
votes
2
replies
1.6k
views
Comment:
Comment: bedops alternative for bedtools -unionbedg ?
6 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.0k
views
Comment:
Comment: Neither pysam nor samtools reading HTTPS-sourced BAM file correctly
6 months ago by
Alex Reynolds
35k
3
votes
5
replies
1.0k
views
Neither pysam nor samtools reading HTTPS-sourced BAM file correctly
bam
pysam
samtools
updated 6 months ago by
Istvan Albert
100k • written 6 months ago by
Alex Reynolds
35k
0
votes
0
replies
3.7k
views
Comment:
Comment: Reproduce the article "The complete sequence of a human genome."
7 months ago by
Alex Reynolds
35k
2,870 results • Page
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