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2
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210
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Answer: Answer: Trouble understanding seemingly contradicting results of GSE analysis (contradic
3 days ago by i.sudbery 19k
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1
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1.1k
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Comment: Comment: How I know if it is a batch effect or are real differences between my controls a
9 days ago by i.sudbery 19k
6
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1
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1.1k
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Answer: Answer: ¿How I know if it is a batch effect or are real differences between my controls
10 days ago by i.sudbery 19k
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1
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382
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Comment: Comment: chromHMM annotations
10 days ago by i.sudbery 19k
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1
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382
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Answer: Answer: chromHMM annotations
12 days ago by i.sudbery 19k
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378
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Comment: Comment: DESeq: too low p-value for RNAseq
13 days ago by i.sudbery 19k
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366
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Comment: Comment: Mathematical/Statistical models to predict mRNA half-life
4 weeks ago by i.sudbery 19k
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1
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414
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Answer: Answer: UMI_extract for paired end reads of micro_RNA
5 weeks ago by i.sudbery 19k
1
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167
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Answer: Answer: Detecting presence of UMI from BAM/fastq files without prior knowledge
5 weeks ago by i.sudbery 19k
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1
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436
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Answer: Answer: conda install -Killed
5 weeks ago by i.sudbery 19k
1
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349
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Answer: Answer: Is it feasible to merge Illumina RNA-Seq data with varying read lengths?
5 weeks ago by i.sudbery 19k
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195
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Comment: Comment: RNA-seq DE with AAV injection
5 weeks ago by i.sudbery 19k
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578
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Comment: Comment: Difference between GLM and Wilcoxon rank sum test
6 weeks ago by i.sudbery 19k
3
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578
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Answer: Answer: Difference between GLM and Wilcoxon rank sum test
6 weeks ago by i.sudbery 19k
0
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479
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Comment: Comment: minimap2 gets killed, but it doesn't explain why
6 weeks ago by i.sudbery 19k
2
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254
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Answer: Answer: Error from cgat gtf2gtf --method=genes-to-unique-chunks
6 weeks ago by i.sudbery 19k
0
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547
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Comment: Comment: Multiple unique reads sharing same UMI barcode
7 weeks ago by i.sudbery 19k
2
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1
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745
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Answer: Answer: How to interpret the output from a DESeq2 WALD test analysis in R to compare gen
7 weeks ago by i.sudbery 19k
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1
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547
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Comment: Comment: Multiple unique reads sharing same UMI barcode
7 weeks ago by i.sudbery 19k
0
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1
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547
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Comment: Comment: Multiple unique reads sharing same UMI barcode
7 weeks ago by i.sudbery 19k
1
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1
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355
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Answer: Answer: perplexed regarding the process of gene expression normalision
7 weeks ago by i.sudbery 19k
1
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269
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Answer: Answer: Heteroscedasticity in RNA-seq data
8 weeks ago by i.sudbery 19k
2
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0
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628
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Answer: Answer: question on how differential expression is affected if there is differential abu
8 weeks ago by i.sudbery 19k
1
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0
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394
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Comment: Comment: Enrichment Analysis with Fisher's exact test
9 weeks ago by i.sudbery 19k
2
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2
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394
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Answer: Answer: Enrichment Analysis with Fisher's exact test
9 weeks ago by i.sudbery 19k
0
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0
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264
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Answer: Answer: Calling variants with UMI-collapsed duplex consensus reads
9 weeks ago by i.sudbery 19k
2
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1
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398
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Answer: Answer: UMI workflow resulting in bams with empty reads
9 weeks ago by i.sudbery 19k
0
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0
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375
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Comment: Comment: How to fix DESeq2 Error in checkFullRank(modelMatrix)
10 weeks ago by i.sudbery 19k
3
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1
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375
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Answer: Answer: How to fix DESeq2 Error in checkFullRank(modelMatrix)
10 weeks ago by i.sudbery 19k
1
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1
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483
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Comment: Comment: How to predication/annotation trans-splicing in genome
10 weeks ago by i.sudbery 19k
0
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0
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397
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Comment: Comment: Difference between mRNA and transcript record types in GFF3 and GTF
10 weeks ago by i.sudbery 19k
2
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1
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397
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Comment: Comment: Difference between mRNA and transcript record types in GFF3 and GTF
10 weeks ago by i.sudbery 19k
5
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1
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571
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Answer: Answer: Why employ normalization methods, and how can they be utilized in DEG analysis?
10 weeks ago by i.sudbery 19k
0
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0
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239
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Answer: Answer: Is it possible to identify the strand of an RNA using UMI?
10 weeks ago by i.sudbery 19k
1
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0
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562
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Comment: Comment: PCA plot interpretation (single population)
11 weeks ago by i.sudbery 19k
2
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0
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760
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Comment: Comment: Tower Server configuration for NGS data analysis
11 weeks ago by i.sudbery 19k
2
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0
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760
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Answer: Answer: Tower Server configuration for NGS data analysis
11 weeks ago by i.sudbery 19k
1
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0
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392
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Comment: Comment: Why do I get DE non-polyadenylated genes in a RNAseq with PoliA library?
12 weeks ago by i.sudbery 19k
1
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0
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248
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Answer: Answer: Differential Abundance between samples
12 weeks ago by i.sudbery 19k
0
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0
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1.6k
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Answer: Answer: GOSeq gene ontology enrichment analysis in rice
12 weeks ago by i.sudbery 19k
0
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0
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1.6k
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Comment: Comment: GOSeq gene ontology enrichment analysis in rice
12 weeks ago by i.sudbery 19k
0
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0
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189
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Answer: Answer: Batch correction for eQTL analysis
12 weeks ago by i.sudbery 19k
6
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1
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959
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Answer: Answer: How to overcome the imposter syndrome in bioinformatics?
12 weeks ago by i.sudbery 19k
2
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1
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1.4k
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Answer: Answer: How to speed Salmon index up
3 months ago by i.sudbery 19k
0
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0
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2.0k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
2
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2.0k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
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1
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2.0k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
0
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0
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635
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Answer: Answer: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
0
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0
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635
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
0
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1
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635
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
1,479 results • Page 1 of 30
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