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Comment: C: Should you normalise gene expression data before meta analysing?
3.7 years ago by lshepard ▴ 470
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2.1k
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Comment: C: Transcript level counts from full length scRNA data
3.8 years ago by lshepard ▴ 470
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1
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2.1k
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Comment: C: Transcript level counts from full length scRNA data
3.8 years ago by lshepard ▴ 470
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2.1k
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Comment: C: Transcript level counts from full length scRNA data
3.8 years ago by lshepard ▴ 470
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2.1k
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Comment: C: Transcript level counts from full length scRNA data
3.8 years ago by lshepard ▴ 470
2
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1.6k
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Comment: C: Difference between annotation from Ensembl and UCSC.
4.5 years ago by lshepard ▴ 470
3
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6.0k
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Comment: C: To generate an scRNA counts file using barcodes.tsv, genes.tsv and matrix.mtx fi
4.7 years ago by lshepard ▴ 470
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1.4k
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Comment: C: Promoter in gene body region of another gene - feedback on definition or consens
4.9 years ago by lshepard ▴ 470
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1.4k
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Comment: C: Promoter in gene body region of another gene - feedback on definition or consens
4.9 years ago by lshepard ▴ 470
10
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5
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1.4k
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Promoter in gene body region of another gene - feedback on definition or consensus
annotation
updated 4.9 years ago by 23k • written 4.9 years ago by ▴ 470
1
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2.7k
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Comment: C: How to merge Kallisto TSV files for use with Tximport
4.9 years ago by lshepard ▴ 470
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1.7k
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Answer: A: DESeq2 lfc shrinkage
4.9 years ago by lshepard ▴ 470
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8.7k
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Comment: C: Interpreting Bismark Methylation Extractor output
4.9 years ago by lshepard ▴ 470
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8.7k
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Comment: C: Interpreting Bismark Methylation Extractor output
4.9 years ago by lshepard ▴ 470
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1
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8.7k
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Comment: C: Interpreting Bismark Methylation Extractor output
4.9 years ago by lshepard ▴ 470
2
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1
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8.7k
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Answer: A: Interpreting Bismark Methylation Extractor output
4.9 years ago by lshepard ▴ 470
1
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0
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2.9k
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Comment: C: ATAC-seq vs Bisulfite-sequencing
4.9 years ago by lshepard ▴ 470
1
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0
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8.2k
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Comment: C: Is Biostar Killing The Bioinformatics Core?
4.9 years ago by lshepard ▴ 470
0
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1
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2.9k
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Comment: C: ATAC-seq vs Bisulfite-sequencing
4.9 years ago by lshepard ▴ 470
1
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1.1k
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Comment: C: identify gene function
4.9 years ago by lshepard ▴ 470
2
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1
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1.5k
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Answer: A: Protein coding annotation from UCSC
4.9 years ago by lshepard ▴ 470
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3.0k
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Comment: C: Trimmomatic output file Issue
4.9 years ago by lshepard ▴ 470
2
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1
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2.0k
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Answer: A: Analysis of RNA-seq data of Ion Torrent
5.0 years ago by lshepard ▴ 470
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0
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698
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Answer: A: To show methylation loci
5.0 years ago by lshepard ▴ 470
1
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1
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1.3k
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Comment: C: What percent of reads should align to a reference gene to successfully validate
5.0 years ago by lshepard ▴ 470
1
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1
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1.3k
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Answer: A: What percent of reads should align to a reference gene to successfully validate
5.0 years ago by lshepard ▴ 470
1
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0
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1.1k
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Comment: C: How to find Chip-seq and Methylome data to compare with my results?
5.1 years ago by lshepard ▴ 470
3
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1
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5.9k
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Comment: C: Running STAR aligner with paired-end and single-end reads simultaneously
5.1 years ago by lshepard ▴ 470
0
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0
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861
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Comment: C: Grad school help: Transcriptomics and Pathways Analysis
5.1 years ago by lshepard ▴ 470
1
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0
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17k
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Comment: C: DESeq2 and integers values
5.1 years ago by lshepard ▴ 470
0
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0
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1.3k
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Comment: C: What's the difference between "hg19" and "hg19 v19"
5.1 years ago by lshepard ▴ 470
1
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1
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17k
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Comment: C: DESeq2 and integers values
5.1 years ago by lshepard ▴ 470
0
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1.0k
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Answer: A: Is there any software to generate simulated WGBS data based on a background
5.1 years ago by lshepard ▴ 470
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7.3k
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Comment: C: miRNA differential expression
5.1 years ago by lshepard ▴ 470
0
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1
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1.3k
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Comment: C: What's the difference between "hg19" and "hg19 v19"
5.1 years ago by lshepard ▴ 470
0
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0
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3.4k
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Comment: C: RNA-Seq QC for aligned files (bam)
5.1 years ago by lshepard ▴ 470
2
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866
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Comment: C: Filter read level data after RNA-seq alignment
5.2 years ago by lshepard ▴ 470
0
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0
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1.2k
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Comment: C: Identify adapter position
5.2 years ago by lshepard ▴ 470
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1
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1.8k
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Comment: C: Interpreting DEseq2 results
5.2 years ago by lshepard ▴ 470
1
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0
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1.5k
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Comment: C: Assembly database choice for RNA-seq and ChIP-seq
5.2 years ago by lshepard ▴ 470
0
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1
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1.5k
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Answer: A: Assembly database choice for RNA-seq and ChIP-seq
5.2 years ago by lshepard ▴ 470
1
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6
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1.5k
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Assembly database choice for RNA-seq and ChIP-seq
RNA-Seq ChIP-Seq
5.2 years ago by lshepard ▴ 470
0
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0
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1.5k
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Comment: C: Assembly database choice for RNA-seq and ChIP-seq
5.2 years ago by lshepard ▴ 470
0
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0
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1.2k
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Answer: A: rna seq single ended -Information on Rseqc report
5.2 years ago by lshepard ▴ 470
0
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1
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1.5k
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Comment: C: Assembly database choice for RNA-seq and ChIP-seq
5.2 years ago by lshepard ▴ 470
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0
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1.7k
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Comment: C: Recommendation for statistics book
5.6 years ago by lshepard ▴ 470
0
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1
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141k
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Comment: C: The Biostar Handbook. A bioinformatics e-book for beginners.
5.9 years ago by lshepard ▴ 470
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1
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4.1k
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Comment: C: TCGA RNASeq Data
6.1 years ago by lshepard ▴ 470
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1.2k
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Answer: A: Creating genome alignment
6.2 years ago by lshepard ▴ 470
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0
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1.0k
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Comment: C: Sample data for RNA STAR
6.2 years ago by lshepard ▴ 470
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