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Bert Overduin ♦ 3.6k
Status: New
Handle: @Bert Overduin1403
Reputation: 3630
Email: b*********@gmail.com
Joined: 8 months ago
Last seen: 3.6 years ago
Location: Edinburgh Genomics, The University of Edinburgh

I am a wet lab biologist turned IT consultant turned bioinformatician. After working for 9 years at the European Bioinformatics Institute (EBI) as Helpdesk & Outreach Officer within the Ensembl group, I started on 1 May 2014 at Edinburgh Genomics, where I am responsible for organising bioinformatics training and outreach.

Comment: C: What Are The Public Sql Servers For Bioinformatics ?
1 Vote | 0 Replies
8.1 years ago
Bert Overduin
♦ 3.6k
• updated 17 months ago
RamRS
21k
Comment: C: How to link UCSC peptide to transcripts
0 Votes | 1 Reply
5.3 years ago
Bert Overduin
♦ 3.6k
Comment: C: Missing gene symbols in biomart
0 Votes | 0 Replies
5.3 years ago
Bert Overduin
♦ 3.6k
Answer: A: Convert Rs# to .VCF file?
0 Votes | 0 Replies
5.3 years ago
Bert Overduin
♦ 3.6k
Answer: A: number of .bam reads mapping to genes in gff format
0 Votes | 0 Replies
5.3 years ago
Bert Overduin
♦ 3.6k
Comment: C: First Intron extraction from ensembl
1 Vote | 1 Reply
5.5 years ago
Bert Overduin
♦ 3.6k
Answer: A: check if ensembl_gene_id maps to primary assembly
2 Votes | 0 Replies
5.5 years ago
Bert Overduin
♦ 3.6k
Answer: A: genome assemlers specifications
0 Votes | 0 Replies
5.5 years ago
Bert Overduin
♦ 3.6k
Answer: A: Converting Ensemble Gene IDs from mmseq output file
4 Votes | 0 Replies
5.5 years ago
Bert Overduin
♦ 3.6k
Comment: C: First Intron extraction from ensembl
1 Vote | 1 Reply
5.6 years ago
Bert Overduin
♦ 3.6k
Comment: C: GRCh38 Annotation for non coding RNA (e.g. miRNA)
0 Votes | 0 Replies
5.6 years ago
Bert Overduin
♦ 3.6k
Answer: A: GRCh38 Annotation for non coding RNA (e.g. miRNA)
1 Vote | 1 Reply
5.6 years ago
Bert Overduin
♦ 3.6k
Answer: A: Y chromosome's gene list
1 Vote | 0 Replies
5.6 years ago
Bert Overduin
♦ 3.6k
Answer: A: Total length covered by BAM alignment (or BED file)
2 Votes | 0 Replies
5.6 years ago
Bert Overduin
♦ 3.6k
Comment: C: First Intron extraction from ensembl
1 Vote | 1 Reply
5.6 years ago
Bert Overduin
♦ 3.6k
Comment: C: First Intron extraction from ensembl
1 Vote | 1 Reply
5.6 years ago
Bert Overduin
♦ 3.6k
Answer: A: Artificial Sequences in ncbi
0 Votes | 0 Replies
5.6 years ago
Bert Overduin
♦ 3.6k
Comment: C: Question about UniProt Isoforms
0 Votes | 0 Replies
5.6 years ago
Bert Overduin
♦ 3.6k
Comment: C: First Intron extraction from ensembl
0 Votes | 1 Reply
5.6 years ago
Bert Overduin
♦ 3.6k
Answer: A: too many non-synonymous SNPs
3 Votes | 1 Reply
5.6 years ago
Bert Overduin
♦ 3.6k
Answer: A: How to scrape data from UCSC genome browser?
0 Votes | 0 Replies
5.6 years ago
Bert Overduin
♦ 3.6k
Comment: C: Reference sequence and gtf annotation.
0 Votes | 1 Reply
5.6 years ago
Bert Overduin
♦ 3.6k
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