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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
5 months ago by Vasu ▴ 770
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1.2k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
5 months ago by Vasu ▴ 770
0
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1
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1.2k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
5 months ago by Vasu ▴ 770
0
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1
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1.2k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
5 months ago by Vasu ▴ 770
0
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0
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1.2k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
5 months ago by Vasu ▴ 770
0
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2
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1.2k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
5 months ago by Vasu ▴ 770
3
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14
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1.2k
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How to extract specific region from multiple bam files and merge the outputs into single bam?
bam rna-seq
updated 5 months ago by 141k • written 5 months ago by ▴ 770
0
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1
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1.4k
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Comment: Comment: How to remove uncharacterized chromosomes from GTF file?
15 months ago by Vasu ▴ 770
3
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3
replies
1.4k
views
How to remove uncharacterized chromosomes from GTF file?
grep gtf awk
updated 15 months ago by 11k • written 15 months ago by ▴ 770
2
votes
8
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1.4k
views
How to subset a gtf based on names in the third column of another file in a single command?
grep rnaseq awk
updated 19 months ago by 141k • written 19 months ago by ▴ 770
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0
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1.4k
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Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
19 months ago by Vasu ▴ 770
0
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0
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1.4k
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Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
19 months ago by Vasu ▴ 770
0
votes
0
replies
1.4k
views
Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
19 months ago by Vasu ▴ 770
0
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0
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738
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Comment: Comment: How to read fastqs from different sequencing runs rather than merging?
2.0 years ago by Vasu ▴ 770
1
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4
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738
views
How to read fastqs from different sequencing runs rather than merging?
ngs rnaseq fastq
updated 24 months ago by ★ 5.8k • written 2.0 years ago by ▴ 770
12
votes
12
replies
12k
views
7 follow
Gene set enrichment analysis with logFC and PValue
RNA-Seq gsea r gene expression genesetenrichment
updated 3.2 years ago by ▴ 110 • written 5.5 years ago by ▴ 770
19
votes
5
replies
18k
views
6 follow
showing specific GO pathways in the dotplot or cnetplot
RNA-Seq R clusterprofiler dotplot goenrichment
updated 3.0 years ago by ▴ 10 • written 5.2 years ago by ▴ 770
2
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0
replies
1.4k
views
Answer: A: Gene Ontology using clusterProfiler
3.9 years ago by Vasu ▴ 770
1
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0
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1.7k
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Answer: A: Pathway/Gene set z-score from log2FC
3.9 years ago by Vasu ▴ 770
0
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1
reply
1.9k
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Comment: C: RNA seq data analysis and building co expression network
3.9 years ago by Vasu ▴ 770
0
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1
reply
2.4k
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Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
4.0 years ago by Vasu ▴ 770
0
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0
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2.4k
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Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
4.0 years ago by Vasu ▴ 770
0
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1
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2.4k
views
Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
4.0 years ago by Vasu ▴ 770
5
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6
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2.4k
views
Question about WGCNA Module Eigengenes to Pathway analysis
RNA-Seq wgcna geneexpression coexpressionnetwork
updated 4.0 years ago by 3.6k • written 4.0 years ago by ▴ 770
1
vote
1
reply
874
views
Identification of transcription factor - gene regulation information
RNA-Seq tcga transcription factor
updated 4.3 years ago by 20 • written 4.9 years ago by ▴ 770
0
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0
replies
1.3k
views
Comment: C: Different miRNAs with same miRNA regions in TCGA
4.5 years ago by Vasu ▴ 770
0
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1
reply
1.3k
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Comment: C: Different miRNAs with same miRNA regions in TCGA
4.5 years ago by Vasu ▴ 770
1
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4
replies
1.3k
views
Different miRNAs with same miRNA regions in TCGA
tcga mirna mirtarbase mirnaseq
4.5 years ago by Vasu ▴ 770
0
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1
reply
1.5k
views
Comment: C: Question about Isoform expression (miRNA) data from TCGA
4.6 years ago by Vasu ▴ 770
8
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3
replies
1.5k
views
Question about Isoform expression (miRNA) data from TCGA
mirna mirnaseq mirbase mirtarbase tcga
updated 4.6 years ago by 19k • written 4.6 years ago by ▴ 770
2
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0
replies
2.1k
views
Comment: C: Question about miRNA nomenclature
4.6 years ago by Vasu ▴ 770
0
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1
reply
2.1k
views
Comment: C: Question about miRNA nomenclature
4.6 years ago by Vasu ▴ 770
0
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0
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2.1k
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Comment: C: Question about miRNA nomenclature
4.6 years ago by Vasu ▴ 770
0
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1
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2.1k
views
Comment: C: Question about miRNA nomenclature
4.6 years ago by Vasu ▴ 770
17
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8
replies
2.1k
views
Question about miRNA nomenclature
mirna mirnaseq mirbase
updated 2.2 years ago by 19k • written 4.6 years ago by ▴ 770
3
votes
1
reply
8.6k
views
Ensembl id to GeneSymbol with biomart
biomart
updated 4.8 years ago by 20 • written 6.7 years ago by ▴ 770
1
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0
replies
1.2k
views
Comment: C: Question about chromosomal instability
5.0 years ago by Vasu ▴ 770
0
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1
reply
1.2k
views
Comment: C: Question about chromosomal instability
5.0 years ago by Vasu ▴ 770
0
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1
reply
1.2k
views
Comment: C: Question about chromosomal instability
5.0 years ago by Vasu ▴ 770
0
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0
replies
2.0k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
5.0 years ago by Vasu ▴ 770
0
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1
reply
2.0k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
5.0 years ago by Vasu ▴ 770
0
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1
reply
2.0k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
5.0 years ago by Vasu ▴ 770
11
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10
replies
2.0k
views
Question about differentially expressed genes selection for low sample size data
RNA-Seq R geneexpression edger pvalue
updated 5.0 years ago by ★ 1.3k • written 5.0 years ago by ▴ 770
3
votes
6
replies
1.2k
views
Question about chromosomal instability
copy number chromosome gene R genome
updated 5.0 years ago by 87k • written 5.0 years ago by ▴ 770
34
votes
35
replies
17k
views
8 follow
Sample names for TCGA data from GDC-legacy archive
RNA-Seq tcga gdc
updated 5.1 years ago by ▴ 30 • written 6.1 years ago by ▴ 770
0
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1
reply
1.9k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
5.2 years ago by Vasu ▴ 770
0
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1
reply
1.9k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
5.2 years ago by Vasu ▴ 770
0
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1
reply
1.9k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
5.2 years ago by Vasu ▴ 770
2
votes
7
replies
1.9k
views
Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
survival gdc cbioportal tcga clinicaldata
5.2 years ago by Vasu ▴ 770
3
votes
0
replies
3.0k
views
Comment: C: Error with merge_result with dataframes using clusterprofiler
5.2 years ago by Vasu ▴ 770
296 results • Page 1 of 6
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