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Comment: Comment: Force tabix to index on a single column
2.8 years ago by b10hazard ▴ 30
0
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1
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1.0k
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Comment: Comment: Force tabix to index on a single column
2.8 years ago by b10hazard ▴ 30
0
votes
1
reply
1.0k
views
Comment: Comment: Force tabix to index on a single column
2.8 years ago by b10hazard ▴ 30
0
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6
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1.0k
views
Force tabix to index on a single column
tabix
2.8 years ago by b10hazard ▴ 30
0
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0
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2.3k
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Comment: C: Why does BWA sometimes omit X0 and X1 tags?
4.4 years ago by b10hazard ▴ 30
0
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1
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2.3k
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Comment: C: Why does BWA sometimes omit X0 and X1 tags?
4.4 years ago by b10hazard ▴ 30
4
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8
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2.3k
views
Why does BWA sometimes omit X0 and X1 tags?
bwa burrows-wheeler aligner alignment DNA-seq
updated 4.4 years ago by 35k • written 4.4 years ago by ▴ 30
0
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0
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2.3k
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Comment: C: Why does BWA sometimes omit X0 and X1 tags?
4.4 years ago by b10hazard ▴ 30
1
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0
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2.3k
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Comment: C: Why does BWA sometimes omit X0 and X1 tags?
4.4 years ago by b10hazard ▴ 30
0
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0
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3.9k
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Comment: C: cannot make BLAST database using makeblastdb command line tool
4.4 years ago by b10hazard ▴ 30
0
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0
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3.9k
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Comment: C: cannot make BLAST database using makeblastdb command line tool
4.4 years ago by b10hazard ▴ 30
0
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1
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3.9k
views
Comment: C: cannot make BLAST database using makeblastdb command line tool
4.4 years ago by b10hazard ▴ 30
0
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0
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3.9k
views
Comment: C: cannot make BLAST database using makeblastdb command line tool
4.4 years ago by b10hazard ▴ 30
0
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1
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3.9k
views
Comment: C: cannot make BLAST database using makeblastdb command line tool
4.4 years ago by b10hazard ▴ 30
1
vote
11
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3.9k
views
cannot make BLAST database using makeblastdb command line tool
blastn makeblastdb
4.4 years ago by b10hazard ▴ 30
0
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0
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1.7k
views
Comment: C: Blat (v3.4) installation error
4.4 years ago by b10hazard ▴ 30
0
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0
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3.1k
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Comment: C: suppress pysam index warnings.
4.4 years ago by b10hazard ▴ 30
0
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0
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3.1k
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Comment: C: suppress pysam index warnings.
4.4 years ago by b10hazard ▴ 30
2
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5
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3.1k
views
suppress pysam index warnings.
pysam python bam
updated 4.4 years ago by 3.0k • written 4.4 years ago by ▴ 30
1
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2
replies
2.8k
views
what is the fastest way to extract reads of a specific barcode from a fastq
bcl2fastq next-gen fastq demultiplexing illumina
4.8 years ago by b10hazard ▴ 30
0
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0
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1.6k
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Comment: C: Will Kallisto or Salmon perform streaming alignment from the Sequence Read Archi
5.6 years ago by b10hazard ▴ 30
4
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4
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1.6k
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Will Kallisto or Salmon perform streaming alignment from the Sequence Read Archive?
kallisto salmon pseudoaligners
updated 5.6 years ago by 43k • written 5.6 years ago by ▴ 30
0
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1
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2.8k
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Comment: C: How do I get the read counts for a specific exon
6.1 years ago by b10hazard ▴ 30
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0
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2.8k
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Comment: C: How do I get the read counts for a specific exon
6.1 years ago by b10hazard ▴ 30
11
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15
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2.8k
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How do I get the read counts for a specific exon
bam exon
updated 6.1 years ago by 43k • written 6.1 years ago by ▴ 30
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1
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2.8k
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Comment: C: How do I get the read counts for a specific exon
6.1 years ago by b10hazard ▴ 30
0
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4
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2.8k
views
Comment: C: How do I get the read counts for a specific exon
6.1 years ago by b10hazard ▴ 30
8
votes
2
replies
2.7k
views
allele depth and depth do not match in my vcf file
vcf
updated 6.1 years ago by 161k • written 6.1 years ago by ▴ 30
0
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1
reply
1.2k
views
how would I find SNPs that are highly polymorphic between populations in dbSNP
dbsnp SNP allele ncbi
updated 6.1 years ago by ▴ 870 • written 6.1 years ago by ▴ 30
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2
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4.7k
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Comment: C: how do I get a vcf containing germline snps from dbSNP?
6.1 years ago by b10hazard ▴ 30
1
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0
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4.7k
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Comment: C: how do I get a vcf containing germline snps from dbSNP?
6.1 years ago by b10hazard ▴ 30
8
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6
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4.7k
views
how do I get a vcf containing germline snps from dbSNP?
dbsnp ncbi vcf
updated 6.1 years ago by 87k • written 6.1 years ago by ▴ 30
0
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0
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4.7k
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Comment: C: Genomic Alignment And Snp/Indel Calling - My First Ever "Pipeline"
6.1 years ago by b10hazard ▴ 30
0
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1
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1.9k
views
Comment: C: Where can I get a breakdown of RefSeq annotation statistics?
6.1 years ago by b10hazard ▴ 30
0
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0
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1.9k
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Comment: C: Where can I get a breakdown of RefSeq annotation statistics?
6.1 years ago by b10hazard ▴ 30
0
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1
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1.9k
views
Comment: C: Where can I get a breakdown of RefSeq annotation statistics?
6.1 years ago by b10hazard ▴ 30
7
votes
12
replies
1.9k
views
Where can I get a breakdown of RefSeq annotation statistics?
refseq gencode annotation
updated 6.2 years ago by 141k • written 6.2 years ago by ▴ 30
0
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1
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1.9k
views
Comment: C: Where can I get a breakdown of RefSeq annotation statistics?
6.2 years ago by b10hazard ▴ 30
0
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0
replies
928
views
Will pseudoaligners detect rearrangements based on known transcripts?
RNA-Seq kallisto pseudoaligners
6.2 years ago by b10hazard ▴ 30
0
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1
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1.9k
views
Comment: C: suggestions to compare gene counts
6.2 years ago by b10hazard ▴ 30
0
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3
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1.9k
views
suggestions to compare gene counts
RNA-Seq STAR-aligner featureCounts
updated 6.2 years ago by ★ 2.9k • written 6.2 years ago by ▴ 30
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