Biostar Beta. Not for public use.
Rory Stark • 510
Status: New
Handle: @Rory Stark10855
Reputation: 510
Email: r**************@cruk.cam.ac.uk
Joined: 13 months ago
Last seen: 14 months ago
Location: University of Cambridge, Cancer Research UK - Cambridge Institute

Posts Awards
0
Votes
0
Replies
107
Views
Answer: A: Diffbind affinity based analysis
14 months ago
Rory Stark • 510
0
Votes
0
Replies
249
Views
Answer: A: how to retrieve binding affinity matrix in diffbind
16 months ago
Rory Stark • 510
1
Vote
2
Replies
376
Views
Comment: C: DiffBind: Error in `.rowNamesDF<-`(x, value = value) : invalid 'row.names' lengt
16 months ago
Rory Stark • 510
0
Votes
0
Replies
374
Views
Answer: A: create a RC matrix with narrowPeak data
2.0 years ago
Rory Stark • 510
1
Vote
1
Reply
500
Views
Answer: A: How to correlate chip seq peaks?
2.1 years ago
Rory Stark • 510
0
Votes
0
Replies
535
Views
Comment: C: question about DiffBind
2.1 years ago
Rory Stark • 510
5
Votes
0
Replies
1.1k
Views
Answer: A: Diffbind for ATAC-seq data with no controls
2.2 years ago
Rory Stark • 510
3
Votes
1
Reply
1.1k
Views
Answer: A: Diffbind - Very high proportion of significant peaks
2.3 years ago
Rory Stark • 510
0
Votes
0
Replies
531
Views
Answer: A: Diffbind error : sequences from an unspecified genome; no seqlengths
2.3 years ago
Rory Stark • 510
5
Votes
2
Replies
1.8k
Views
Answer: A: What is the best method ChIPseq differential binding analysis?
2.5 years ago
Rory Stark • 510
0
Votes
1
Reply
760
Views
Comment: C: DiffBind - Erroneous Affinity Shift In One Direction
2.5 years ago
Rory Stark • 510
1
Vote
1
Reply
760
Views
Answer: A: DiffBind - Erroneous Affinity Shift In One Direction
2.5 years ago
Rory Stark • 510
0
Votes
0
Replies
512
Views
Answer: A: Diffbind package DESeq2 analysis
2.6 years ago
Rory Stark • 510
5
Votes
1
Reply
1.7k
Views
Answer: A: Huge difference between differential peaks with EdgeR and DESeq2 using Diffbind
2.8 years ago
Rory Stark • 510
3
Votes
0
Replies
1000
Views
Answer: A: [How to Save plots in R] DiffBind
2.8 years ago
Rory Stark • 510
5
Votes
1
Reply
3.5k
Views
Answer: A: Visualization for ChIP-seq analysis
2.9 years ago
Rory Stark • 510
2
Votes
0
Replies
913
Views
Answer: A: Convert DiffBind output to standard BED or NarrowPeak format
2.9 years ago
Rory Stark • 510
3
Votes
2
Replies
2.0k
Views
Answer: A: How many biological replicates needed for ChIP seq experiments?
2.9 years ago
Rory Stark • 510
1
Vote
1
Reply
2.5k
Views
Answer: A: Converting narrowPeak to bed
2.9 years ago
Rory Stark • 510
1
Vote
1
Reply
808
Views
Answer: A: Comparison of ChIPseq enrichment in specific regions
3.3 years ago
Rory Stark • 510
10
Votes
2
Replies
3.2k
Views
Tool: ChIPQC: a package for assessing quality of ChIP-seq samples and experiments
ChIP-Seq quality assessment quality control Tool
6.3 years ago
Rory Stark • 510 • updated 5.4 years ago
Ming Tang ♦ 2.5k
5
Votes
0
Replies
4.8k
Views
Answer: A: Chips-Seq Replicates And Motif Discovery: What Is The Most Sound Way To Deal Wit
6.3 years ago
Rory Stark • 510
0
Votes
0
Replies
3.3k
Views
Comment: C: Replicates In Chip-Seq
6.3 years ago
Rory Stark • 510
Powered by the version 2.3