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Showing : transcriptomics • reset
2
Votes
7
Replies
184
Views
Where is the (hg19) reference data for transcript isoforms' relative abundances for each gene?
RNA-Seq transcriptomics isoforms
13 months ago
Joel Wallenius • 10 • updated 13 months ago
i.sudbery 4.7k
0
Votes
2
Replies
162
Views
Confounding factors when comparing effects of expression between RNA-seq samples and qPCR samples?
RNA-Seq qrtpcr qpcr transcriptomics expression
13 months ago
michael.nagle • 100 • updated 13 months ago
Devon Ryan 90k
0
Votes
0
Replies
113
Views
Approaches to sum gene expression into pathways/other gene sets and problem of negatively correlated genes
RNA-Seq microarray gsva pathways transcriptomics
13 months ago
mdihcroe • 0
2
Votes
3
Replies
326
Views
De novo transcriptome assembly produce too many transcripts
assembly transcriptomics RNA-Seq trinity
16 months ago
21afiq • 0 • updated 16 months ago
Corentin • 290
1
Vote
3
Replies
296
Views
baseline error distribution and missing values
gene expression LPE Transcriptomics
21 months ago
vasilislenis • 100 • updated 20 months ago
Kevin Blighe 43k
0
Votes
0
Replies
290
Views
Interrogate & visualise transcriptomics data, at scale, without support of a bioinformatician
Transcriptomics Expression Data Tool
21 months ago
craig.smith • 0
0
Votes
0
Replies
412
Views
How associate raw reads with MetaCyc/Taxonomy from HUMAnN2?
humann2 transcriptomics metacyc humann
22 months ago
O.rka • 110
1
Vote
2
Replies
367
Views
Show RNASeq coverage distribution over transcript length
RNA-Seq BAM sequencing Transcriptomics
23 months ago
Federico Giorgi • 490 • updated 23 months ago
Carlo Yague ♦ 4.5k
0
Votes
0
Replies
289
Views
Difference of 5' and 3' mRNA analysis
RNA-Seq transcriptomics 10x
23 months ago
heir_of_isildur88 • 10
6
Votes
12
Replies
2.5k
Views
Simplest way to perform GSEA from a weighted list of entrez gene ids
gsea enrichment transcriptomics
3.9 years ago
rachel.cavill • 30 • updated 2.1 years ago
pshubhamoy • 20
0
Votes
0
Replies
384
Views
Efficient Sequence Length Comparison
python transcriptomics OrthoFinder orthologs
2.2 years ago
alexander.trouern-trend • 0
0
Votes
0
Replies
565
Views
Bioinformatician Job 2018 @ MRC-University Of Glasgow Centre For Virus Research
transcriptomics viral genomics Job bioinformatics
2.3 years ago
David Robertson • 0
0
Votes
5
Replies
1.0k
Views
counts in rna-seq cpm
RNA-Seq edgeR cpm transcriptomics data
2.3 years ago
vm.higareda • 20 • updated 2.3 years ago
h.mon 25k
2
Votes
1
Reply
593
Views
Best method to assemble low-abundance transcripts?
assembly rna-seq illumina transcriptomics
2.3 years ago
molly77 • 10 • updated 2.3 years ago
Macspider ♦ 2.8k
3
Votes
3
Replies
787
Views
Internship in Genomics and Transcriptomics
Genomics Transcriptomics Internship Job
2.3 years ago
Oommen K Mathew • 0
0
Votes
0
Replies
467
Views
Salmon -- prepare reads
salmon transcriptomics RNA-seq NGS
2.3 years ago
afabian • 0
4
Votes
7
Replies
437
Views
Algorithms to know when starting out analyzing transcriptome data
RNA-Seq transcriptomics algorithms
2.4 years ago
dickson8988 • 0
2
Votes
6
Replies
1.1k
Views
edgeR understanding statistics
RNA-Seq edgeR statistics transcriptomics
2.6 years ago
vm.higareda • 20 • updated 2.6 years ago
Kevin Blighe 43k
2
Votes
0
Replies
586
Views
Postdoctoral Fellow: Algorithms for Long Read Transcript Quantification (Singapore)
rna-seq long read transcriptomics Job
2.8 years ago
gokej • 20
7
Votes
4
Replies
909
Views
SNPEFF for de novo transcriptome annotation
SNP Assembly Transcriptomics Denovo
2.9 years ago
Arsalan • 10 • updated 2.9 years ago
moxu • 440
0
Votes
0
Replies
495
Views
basic question cuffdiff
RNA-Seq cuffdiff transcriptomics
3.0 years ago
vm.higareda • 20
0
Votes
4
Replies
642
Views
How to find and download the Database from a particular gene in NCBI
RNA-Seq Transcriptomics
3.0 years ago
a.mailli • 0
1
Vote
0
Replies
950
Views
A postdoctoral position is available at CIBIO, University of Trento, Trento, Italy
transcriptomics epigenetics genomics Job
3.2 years ago
Nicola Casiraghi • 450 • updated 3.2 years ago
genomax 68k
0
Votes
0
Replies
684
Views
Periodic versus Linear Trends in Gene Expression Time Series Plots?
RNA-Seq software error time-series transcriptomics
3.2 years ago
tfhahn • 50
0
Votes
1
Reply
731
Views
Functional interpretation of a bacterial transcriptome
transcriptomics bacteria functional annotation
3.3 years ago
fhsantanna • 440
1
Vote
1
Reply
1.7k
Views
Data resources for Chromatin accessibility (DNAse, FAIRE, ATAC - seq) and Transcriptomics (RNA-seq, expression profilling)
Chromatin Accessibility Transcriptomics
4.2 years ago
Bioinformatist Newbie • 230 • updated 3.4 years ago
apa@stowers • 420
0
Votes
0
Replies
1.8k
Views
Comparison of module expression across WGCNA networks
WGCNA Transcriptomics
3.5 years ago
dmcleanuk • 0
0
Votes
3
Replies
1.7k
Views
What is the state of multi-omics dataset ?
proteomics transcriptomics metabolomics
4.3 years ago
tevlon84 • 30 • updated 3.6 years ago
ypriverol • 0
0
Votes
0
Replies
852
Views
Paired transcriptomics and lipidomics data
RNA-Seq transcriptomics lipidomics classification
3.6 years ago
ncl.lazzarini • 90
0
Votes
6
Replies
928
Views
Comparison of DEG lists
limma microarray transcriptomics
3.6 years ago
dmcleanuk • 0
1
Vote
2
Replies
629
Views
Do I need to explicitly remove rRNA from E. coli RNAseq data?
rrna rnaseq ecoli transcriptomics
3.6 years ago
Lina F • 150
1
Vote
1
Reply
924
Views
How to (1) combine two loci into one gene to correct genome and (2) re-run Cuffdiff to find correct FPKM of combined gene
genomics transcriptomics RNA-Seq RNA cDNA
3.7 years ago
michael.nagle • 100
2
Votes
13
Replies
1.2k
Views
Viral RNA-Seq Cufflinks not producing output
cufflinks RNA-Seq rna-seq transcriptomics
3.8 years ago
Dan Gaston 7.1k
0
Votes
2
Replies
1.1k
Views
Compute for individual Fst of SNPs from a transcriptomic data (pooled samples)
SNP Transcriptomics
3.8 years ago
jfo • 10
0
Votes
0
Replies
775
Views
Dynamic Functional Analysis Tool for Time-course or Multiple Comparisons Omics
RNA-Seq transcriptomics microarray analysis Tool
3.9 years ago
nguyenau • 0
0
Votes
0
Replies
828
Views
Simultaneous over expression of transcription factors characterization
RNA-Seq PCA Simulation transcriptomics
3.9 years ago
sebastiano.curreli • 0
2
Votes
0
Replies
1.3k
Views
How to do pathway analysis with transcriptomics data using ArrayAnalysis.org
pathway analysis transcriptomics R Tutorial
3.9 years ago
friederike.ehrhart • 20
2
Votes
3
Replies
873
Views
Aligning RNA-seq data against just a small set of transcripts of interest (and counting)
RNA-Seq alignment transcriptomics
4.1 years ago
jpascualanaya • 10
3
Votes
3
Replies
1.1k
Views
Looking for a review paper on Transcriptomics ? (Recommendation)
RNA-Seq Transcriptomics
4.3 years ago
tevlon84 • 30 • updated 4.3 years ago
Biostar 20
0
Votes
0
Replies
776
Views
Tutorial on integration of transcriptomic and proteomic data for understanding diseases system
transcriptomics proteomics R
4.6 years ago
Bioinformatist Newbie • 230
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