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Showing : transcriptomics • reset
2
Votes
7
Replies
192
Views
Where is the (hg19) reference data for transcript isoforms' relative abundances for each gene?
RNA-Seq transcriptomics isoforms
21 months ago
Joel Wallenius • 10 • updated 21 months ago
i.sudbery 4.7k
0
Votes
2
Replies
172
Views
Confounding factors when comparing effects of expression between RNA-seq samples and qPCR samples?
RNA-Seq qrtpcr qpcr transcriptomics expression
21 months ago
michael.nagle • 100 • updated 21 months ago
Devon Ryan 90k
0
Votes
0
Replies
125
Views
Approaches to sum gene expression into pathways/other gene sets and problem of negatively correlated genes
RNA-Seq microarray gsva pathways transcriptomics
21 months ago
mdihcroe • 0
2
Votes
3
Replies
335
Views
De novo transcriptome assembly produce too many transcripts
assembly transcriptomics RNA-Seq trinity
2.0 years ago
21afiq • 0 • updated 2.0 years ago
Corentin • 290
1
Vote
3
Replies
303
Views
baseline error distribution and missing values
gene expression LPE Transcriptomics
2.4 years ago
vasilislenis • 100 • updated 2.4 years ago
Kevin Blighe 43k
0
Votes
0
Replies
295
Views
Tool: Interrogate & visualise transcriptomics data, at scale, without support of a bioinformatician
Transcriptomics Expression Data Tool
2.4 years ago
craig.smith • 0
0
Votes
0
Replies
417
Views
How associate raw reads with MetaCyc/Taxonomy from HUMAnN2?
humann2 transcriptomics metacyc humann
2.5 years ago
O.rka • 110
1
Vote
2
Replies
374
Views
Show RNASeq coverage distribution over transcript length
RNA-Seq BAM sequencing Transcriptomics
2.6 years ago
Federico Giorgi • 490 • updated 2.6 years ago
Carlo Yague ♦ 4.5k
0
Votes
0
Replies
294
Views
Difference of 5' and 3' mRNA analysis
RNA-Seq transcriptomics 10x
2.6 years ago
heir_of_isildur88 • 10
6
Votes
12
Replies
2.5k
Views
Simplest way to perform GSEA from a weighted list of entrez gene ids
gsea enrichment transcriptomics
4.5 years ago
rachel.cavill • 30 • updated 2.7 years ago
pshubhamoy • 20
0
Votes
0
Replies
392
Views
Efficient Sequence Length Comparison
python transcriptomics OrthoFinder orthologs
2.9 years ago
alexander.trouern-trend • 0
0
Votes
0
Replies
569
Views
Job: Bioinformatician Job 2018 @ MRC-University Of Glasgow Centre For Virus Research
transcriptomics viral genomics Job bioinformatics
2.9 years ago
David Robertson • 0
0
Votes
5
Replies
1.0k
Views
counts in rna-seq cpm
RNA-Seq edgeR cpm transcriptomics data
2.9 years ago
vm.higareda • 20 • updated 2.9 years ago
h.mon 25k
2
Votes
1
Reply
597
Views
Best method to assemble low-abundance transcripts?
assembly rna-seq illumina transcriptomics
3.0 years ago
molly77 • 10 • updated 3.0 years ago
Macspider ♦ 2.8k
3
Votes
3
Replies
795
Views
Job: Internship in Genomics and Transcriptomics
Genomics Transcriptomics Internship Job
3.0 years ago
Oommen K Mathew • 0
0
Votes
0
Replies
472
Views
Salmon -- prepare reads
salmon transcriptomics RNA-seq NGS
3.0 years ago
afabian • 0
4
Votes
7
Replies
443
Views
Algorithms to know when starting out analyzing transcriptome data
RNA-Seq transcriptomics algorithms
3.0 years ago
dickson8988 • 0
2
Votes
6
Replies
1.1k
Views
edgeR understanding statistics
RNA-Seq edgeR statistics transcriptomics
3.3 years ago
vm.higareda • 20 • updated 3.3 years ago
Kevin Blighe 43k
2
Votes
0
Replies
591
Views
Job: Postdoctoral Fellow: Algorithms for Long Read Transcript Quantification (Singapore)
rna-seq long read transcriptomics Job
3.4 years ago
gokej • 20
7
Votes
4
Replies
919
Views
SNPEFF for de novo transcriptome annotation
SNP Assembly Transcriptomics Denovo
3.5 years ago
Arsalan • 10 • updated 3.5 years ago
moxu • 440
0
Votes
0
Replies
500
Views
basic question cuffdiff
RNA-Seq cuffdiff transcriptomics
3.6 years ago
vm.higareda • 20
0
Votes
4
Replies
649
Views
How to find and download the Database from a particular gene in NCBI
RNA-Seq Transcriptomics
3.7 years ago
a.mailli • 0
1
Vote
0
Replies
955
Views
Job: A postdoctoral position is available at CIBIO, University of Trento, Trento, Italy
transcriptomics epigenetics genomics Job
3.9 years ago
Nicola Casiraghi • 450 • updated 3.9 years ago
genomax 68k
0
Votes
0
Replies
691
Views
Periodic versus Linear Trends in Gene Expression Time Series Plots?
RNA-Seq software error time-series transcriptomics
3.9 years ago
tfhahn • 50
0
Votes
1
Reply
738
Views
Functional interpretation of a bacterial transcriptome
transcriptomics bacteria functional annotation
4.0 years ago
fhsantanna • 440
1
Vote
1
Reply
1.7k
Views
Data resources for Chromatin accessibility (DNAse, FAIRE, ATAC - seq) and Transcriptomics (RNA-seq, expression profilling)
Chromatin Accessibility Transcriptomics
4.9 years ago
Bioinformatist Newbie • 230 • updated 4.0 years ago
apa@stowers • 420
0
Votes
0
Replies
1.8k
Views
Comparison of module expression across WGCNA networks
WGCNA Transcriptomics
4.2 years ago
dmcleanuk • 0
0
Votes
3
Replies
1.7k
Views
What is the state of multi-omics dataset ?
proteomics transcriptomics metabolomics
5.0 years ago
tevlon84 • 30 • updated 4.2 years ago
ypriverol • 0
0
Votes
0
Replies
859
Views
Paired transcriptomics and lipidomics data
RNA-Seq transcriptomics lipidomics classification
4.2 years ago
ncl.lazzarini • 90
0
Votes
6
Replies
936
Views
Comparison of DEG lists
limma microarray transcriptomics
4.2 years ago
dmcleanuk • 0
1
Vote
2
Replies
635
Views
Do I need to explicitly remove rRNA from E. coli RNAseq data?
rrna rnaseq ecoli transcriptomics
4.2 years ago
Lina F • 150
1
Vote
1
Reply
931
Views
How to (1) combine two loci into one gene to correct genome and (2) re-run Cuffdiff to find correct FPKM of combined gene
genomics transcriptomics RNA-Seq RNA cDNA
4.3 years ago
michael.nagle • 100
2
Votes
13
Replies
1.3k
Views
Viral RNA-Seq Cufflinks not producing output
cufflinks RNA-Seq rna-seq transcriptomics
4.4 years ago
Dan Gaston 7.1k
0
Votes
2
Replies
1.2k
Views
Compute for individual Fst of SNPs from a transcriptomic data (pooled samples)
SNP Transcriptomics
4.5 years ago
jfo • 10
0
Votes
0
Replies
778
Views
Tool: Dynamic Functional Analysis Tool for Time-course or Multiple Comparisons Omics
RNA-Seq transcriptomics microarray analysis Tool
4.6 years ago
nguyenau • 0
0
Votes
0
Replies
833
Views
Simultaneous over expression of transcription factors characterization
RNA-Seq PCA Simulation transcriptomics
4.6 years ago
sebastiano.curreli • 0
2
Votes
0
Replies
1.3k
Views
Tutorial: How to do pathway analysis with transcriptomics data using ArrayAnalysis.org
pathway analysis transcriptomics R Tutorial
4.6 years ago
friederike.ehrhart • 20
2
Votes
3
Replies
879
Views
Aligning RNA-seq data against just a small set of transcripts of interest (and counting)
RNA-Seq alignment transcriptomics
4.7 years ago
jpascualanaya • 10
3
Votes
3
Replies
1.1k
Views
Looking for a review paper on Transcriptomics ? (Recommendation)
RNA-Seq Transcriptomics
4.9 years ago
tevlon84 • 30 • updated 4.9 years ago
Biostar 20
0
Votes
0
Replies
779
Views
Tutorial on integration of transcriptomic and proteomic data for understanding diseases system
transcriptomics proteomics R
5.2 years ago
Bioinformatist Newbie • 230
3
Votes
0
Replies
2.0k
Views
Job: Postdoctoral position in computational genomics and transcriptional regulation, Copenhagen, Denmark
genomics transcriptomics enhancers promoters Job
5.8 years ago
Robin Andersson • 60
1
Vote
0
Replies
2.8k
Views
Job: PhD student position in computational genomics and transcriptional regulation, Copenhagen, Denmark
genomics transcriptomics enhancers promoters Job
5.8 years ago
Robin Andersson • 60
0
Votes
0
Replies
1.1k
Views
Tutorial: Live webinar on Integrated Analysis using Metadata Framework and Correlation Analysis
proteomics metabolomics transcriptomics genomics Tutorial
5.8 years ago
Genomics • 70
17
Votes
7
Replies
7.0k
Views
News: Upcoming NGS Workshop: A Beginner's Guide to NGS Data Analysis
RNA-Seq workshop Assembly transcriptomics News
6.2 years ago
David Langenberger 8.9k
4
Votes
4
Replies
8.9k
Views
FPKM values / Data analysis
RNA-Seq FPKM Analysis transcriptomics
6.7 years ago
Biogeek • 350
4
Votes
0
Replies
4.0k
Views
Job: Bioinformatics PhD Studentship Available at Massey University, Auckland, New Zealand
Transcriptomics PhD studentship Genomics job Job
6.7 years ago
sschmeier • 80
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