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Showing : single-cell • reset
2
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3
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559
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de novo variant SNP calling from barcoded single-cell data
2 Votes | 3 Replies
19 months ago dominicdhall • 40 • updated 6 months ago niklas.lang • 0
0
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3
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218
Views
Cannot read loom file in scanpy
0 Votes | 3 Replies
7 months ago Batu • 150
1
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2
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477
Views
News: Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
1 Vote | 2 Replies
7 months ago sonpham • 560
0
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0
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169
Views
Job: Postdoctoral Research Associate in cardiovascular genomics, Cambridge UK
0 Votes | 0 Replies
7 months ago a11msp • 110
0
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3
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158
Views
Waddington optimal transport for single-cell analysis
0 Votes | 3 Replies
8 months ago Assa Yeroslaviz ♦ 1.2k
3
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0
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176
Views
Tool: Hera-T: an efficient and accurate algorithm for single-cell transcript quantification
3 Votes | 0 Replies
8 months ago Jennifer Pham • 290
1
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0
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161
Views
Is it advisable to do allele specific expression analysis on single cell RNA-Seq data?
1 Vote | 0 Replies
9 months ago Susmita Mandal • 40 • updated 8 months ago Biostar 20
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0
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252
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Job: Postdoc and Ph.D. positions at KTH in the Lagergren group - Machine Learning in Computational Biology
0 Votes | 0 Replies
8 months ago jens.lagergren • 0
1
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0
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284
Views
(Single-cell RNA seq; R - Seurat) Re-clustering after removing cells using SubsetData
1 Vote | 0 Replies
8 months ago vmallett • 10
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0
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261
Views
Job: Computational Science Research Assistant/Associate
0 Votes | 0 Replies
8 months ago russellshamilton • 0
0
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2
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1.5k
Views
Analyzing MARS-seq (single-cell RNA seq) fastq files
0 Votes | 2 Replies
2.3 years ago Eldad Shulman • 0 • updated 9 months ago kkarri • 0
2
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5
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1.3k
Views
GSEA on single-cell cluster data
2 Votes | 5 Replies
14 months ago roy.granit • 800 • updated 9 months ago marcovicari3 • 0
1
Vote
1
Reply
387
Views
Job: Tackle age-related disease, as genomics lead at Gordian Biotechnology
1 Vote | 1 Reply
11 months ago Martin Borch Jensen • 0
0
Votes
2
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746
Views
10X scRNA-seq: Demultiplex into Samples with I1, R1, and R2 FASTQs
0 Votes | 2 Replies
11 months ago QVINTVS_FABIVS_MAXIMVS ♦ 2.2k • updated 11 months ago swbarnes2 5.7k
1
Vote
2
Replies
386
Views
Is there any way to infer percentage from the branches in trajectories plotted in Monocle?
1 Vote | 2 Replies
15 months ago Batu • 150 • updated 11 months ago leon.zhan • 0
1
Vote
1
Reply
426
Views
Job: Postdoc position in single-cell cancer genomics
1 Vote | 1 Reply
11 months ago Allegra Petti • 10 • updated 11 months ago Chris Miller 20k
0
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0
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377
Views
Job: Bioinformaticist/Computational Biologist - Emory University, Atlanta, GA, USA
0 Votes | 0 Replies
11 months ago amitupadhyay86 • 0 • updated 11 months ago genomax 68k
1
Vote
1
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459
Views
Merging single-cell RNA-seq from different platforms across different conditions
1 Vote | 1 Reply
13 months ago mBrio • 10 • updated 13 months ago Minstein • 100
0
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0
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431
Views
Differential expression using Scran batch corrected data
0 Votes | 0 Replies
13 months ago baldissera152 • 0
0
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1
Reply
771
Views
Smart-seq2 single-cell RNA-Seq
0 Votes | 1 Reply
13 months ago wangdp123 • 150 • updated 13 months ago kristoffer.vittingseerup ♦ 1.8k
0
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1
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354
Views
newSCESet and SingleCellExperiment basic differences and TMM Normalization
0 Votes | 1 Reply
14 months ago hkarakurt • 50
10
Votes
5
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875
Views
How to append the cell barcode and UMI information to the fastq header in paired-end single-cell RNA-seq data?
10 Votes | 5 Replies
15 months ago sc243 • 10
3
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5
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543
Views
Adding optional tags to a BAM file
3 Votes | 5 Replies
15 months ago sc243 • 10
0
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5
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326
Views
How to make this specific "pileup" like plot?
0 Votes | 5 Replies
15 months ago vivekraiiitkgp • 50
0
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0
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301
Views
Job: Bioinformatician (Single Cell Analysis), Earlham Institute, Norwich, UK
0 Votes | 0 Replies
15 months ago cschu181 ♦ 1.7k
3
Votes
2
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660
Views
What is the reasonable proportion of zero counts in single-cell RNA-Seq data
3 Votes | 2 Replies
17 months ago boyu93 • 10 • updated 17 months ago spacemorrissey • 210
1
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3
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1.8k
Views
Why different tSNE plot with Seurat and Monocle if they'r using the same R package?
1 Vote | 3 Replies
17 months ago jgarces • 10 • updated 17 months ago dppb05 • 70
5
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3
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2.4k
Views
What is the difference between single-cell RNA-Seq and typical RNA-Seq in terms of data analysis procedure
5 Votes | 3 Replies
18 months ago wangdp123 • 150 • updated 17 months ago Devon Ryan 90k
6
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6
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1.3k
Views
How to add RG tag into the optional field in a BAM file
6 Votes | 6 Replies
18 months ago gundalav • 270 • updated 18 months ago finswimmer 11k
7
Votes
8
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1.1k
Views
lack of replicates in single-cell RNA-seq
7 Votes | 8 Replies
19 months ago igor 7.7k • updated 19 months ago Friederike 4.2k
3
Votes
1
Reply
1.5k
Views
Variant calling on single-cell data
3 Votes | 1 Reply
23 months ago vinvan • 50 • updated 19 months ago oneillkza • 80
0
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0
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623
Views
Job: Bio informatician - Single cell RNA SEQ Analysis
0 Votes | 0 Replies
19 months ago sandrina.evrard • 0
0
Votes
2
Replies
628
Views
Differential expression between two biological samples sequenced with single-cell RNA-seq with thousands of cells in each
0 Votes | 2 Replies
20 months ago Naim.Mahi • 40
2
Votes
1
Reply
1.2k
Views
Regulatory Network Inference from Single-cell RNAseq Data
2 Votes | 1 Reply
21 months ago whou • 0 • updated 21 months ago genomax 68k
0
Votes
2
Replies
543
Views
Single-cell cluster : up- vs down-regulated marker genes
0 Votes | 2 Replies
21 months ago PR • 10 • updated 21 months ago igor 7.7k
0
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1
Reply
1.2k
Views
GSVA for single-cell marker genes
0 Votes | 1 Reply
22 months ago PR • 10 • updated 21 months ago Biostar 20
0
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2
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469
Views
Having trouble using the SAFE clustering method
0 Votes | 2 Replies
22 months ago Chynoki • 0
0
Votes
0
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657
Views
Job: Research Associate (Bioinformatics) Centre for Trophoblast Research, University of Cambridge, UK
0 Votes | 0 Replies
2.1 years ago russellshamilton • 0
0
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0
Replies
1.0k
Views
scRNA-seq: how to visualize SNN-Cliq clustering result
0 Votes | 0 Replies
2.3 years ago pacman • 50
0
Votes
1
Reply
603
Views
SCDE Package scde.error.models ERROR
0 Votes | 1 Reply
2.4 years ago shg018 • 0 • updated 2.4 years ago dfscruz • 0
58 results • Page 1 of 2
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Answer: test question 1
Answer: test question 1
Markdown
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New test post with the AJAX system
Answer: Markdown
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A: Which Are The Best Programming Languages For A Bioinformatician?
A: Which Are The Best Programming Languages For A Bioinformatician?
Answer: Which Are The Best Programming Languages For A Bioinformatician?
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Autobiographer to lilyjacob987 • 0
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Recent Replies
Answer: " testing dfg " by Natay Aberra 0
testing the autocomplete with mentioned users @Natay-Aberra @natay
Comment: " testing dfg " by Natay Aberra 0
Thanks a lot!
Comment: " testing dfg " by RamRS 21k
Drag and drop is frigging ***AWESOME***
Answer: " testing dfg " by Natay Aberra 0
Hello, test drag and drop of comments
Comment: " testing dfg " by RamRS 21k
Testing twitter embedding: https://www.twitter.com/statnews/status/656174802911129600 https://twitter.com/statnews/status/660506539762057…
Answer: test question 1 by Linda • 20
more than 10 characters
Comment: Which Are The Best Programming Languages For A Bioinformatician? by Digital • 0
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Comment: " testing dfg " by RamRS 21k
Testing highlighting functionality. Using `<span style="background-color: #FFFF00">`: <span style="background-color: #FFFF00">Span trial</…
Comment: " testing dfg " by RamRS 21k
Testing <u>underline</u> functionality.
Comment: " testing dfg " by RamRS 21k
Testing comment with parentheses in URL: (this URL: https://www.ncbi.nlm.nih.gov/search/all/?term=BRCA1%20AND%20(Human%20OR%20Mouse))
Comment: get gene biotype for hg38 refseq by Natay Aberra 0
test the bumping
Comment: get gene biotype for hg38 refseq by genomax 68k
http://test.biostars.org/accounts/profile/2/ http://test.biostars.org/p/34/
Comment: New test post with the AJAX system by Natay Aberra 0
Yeah we will probably end up doing that.
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/accounts/profile/18713/ http://test.biostars.org/p/p371267/#p371295 test the bumping
Comment: Markdown by Natay Aberra 0
http://test.biostars.org/p/p371285/ http://test.biostars.org/accounts/profile/user-2/
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