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Showing : single-cell • reset
2
Votes
3
Replies
576
Views
de novo variant SNP calling from barcoded single-cell data
2 Votes | 3 Replies
RNA-Seq vcf single-cell
23 months ago
dominicdhall • 40 • updated 10 months ago
niklas.lang • 0
0
Votes
3
Replies
227
Views
Cannot read loom file in scanpy
0 Votes | 3 Replies
single-cell loom seurat
11 months ago
Batu • 150
1
Vote
2
Replies
500
Views
Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
1 Vote | 2 Replies
single-cell rna-seq webinar scRNAseq News
11 months ago
sonpham • 560
0
Votes
0
Replies
182
Views
Postdoctoral Research Associate in cardiovascular genomics, Cambridge UK
0 Votes | 0 Replies
genomics single-cell cardiovascular Job
11 months ago
a11msp • 110
0
Votes
3
Replies
171
Views
Waddington optimal transport for single-cell analysis
0 Votes | 3 Replies
wot single-cell 10x RNA-Seq Waddington
12 months ago
Assa Yeroslaviz ♦ 1.2k
3
Votes
0
Replies
186
Views
Hera-T: an efficient and accurate algorithm for single-cell transcript quantification
3 Votes | 0 Replies
scRNA-seq single-cell RNA-Seq Tool
12 months ago
Jennifer Pham • 290
1
Vote
0
Replies
171
Views
Is it advisable to do allele specific expression analysis on single cell RNA-Seq data?
1 Vote | 0 Replies
RNA-Seq Single-cell NGS ASE SNP
13 months ago
Susmita Mandal • 40 • updated 12 months ago
Biostar 20
0
Votes
0
Replies
266
Views
Postdoc and Ph.D. positions at KTH in the Lagergren group - Machine Learning in Computational Biology
0 Votes | 0 Replies
machine learning cancer single-cell postdoc phd Job
12 months ago
jens.lagergren • 0
1
Vote
0
Replies
293
Views
(Single-cell RNA seq; R - Seurat) Re-clustering after removing cells using SubsetData
1 Vote | 0 Replies
RNA-Seq R Seurat Single-cell
12 months ago
vmallett • 10
0
Votes
0
Replies
271
Views
Computational Science Research Assistant/Associate
0 Votes | 0 Replies
single-cell methylome embryogenesis bioinformatics Job
12 months ago
russellshamilton • 0
0
Votes
2
Replies
1.5k
Views
Analyzing MARS-seq (single-cell RNA seq) fastq files
0 Votes | 2 Replies
RNA-Seq alignment single-cell scRNA-seq
2.6 years ago
Eldad Shulman • 0 • updated 12 months ago
kkarri • 0
2
Votes
5
Replies
1.4k
Views
GSEA on single-cell cluster data
2 Votes | 5 Replies
single-cell GSEA R
18 months ago
roy.granit • 800 • updated 13 months ago
marcovicari3 • 0
1
Vote
1
Reply
397
Views
Tackle age-related disease, as genomics lead at Gordian Biotechnology
1 Vote | 1 Reply
RNA-Seq Startup Aging Single-cell Job
15 months ago
Martin Borch Jensen • 0
0
Votes
2
Replies
760
Views
10X scRNA-seq: Demultiplex into Samples with I1, R1, and R2 FASTQs
0 Votes | 2 Replies
10x single-cell RNA-Seq demultiplex
15 months ago
QVINTVS_FABIVS_MAXIMVS ♦ 2.2k • updated 15 months ago
swbarnes2 5.7k
1
Vote
2
Replies
402
Views
Is there any way to infer percentage from the branches in trajectories plotted in Monocle?
1 Vote | 2 Replies
single-cell single cell monocle R trajectory
18 months ago
Batu • 150 • updated 15 months ago
leon.zhan • 0
1
Vote
1
Reply
446
Views
Postdoc position in single-cell cancer genomics
1 Vote | 1 Reply
scRNAseq cancer genomics single-cell rna-seq Job
15 months ago
Allegra Petti • 10 • updated 15 months ago
Chris Miller 20k
0
Votes
0
Replies
385
Views
Bioinformaticist/Computational Biologist - Emory University, Atlanta, GA, USA
0 Votes | 0 Replies
RNA-Seq single-cell Rep-Seq Job
15 months ago
amitupadhyay86 • 0 • updated 15 months ago
genomax 68k
1
Vote
1
Reply
472
Views
Merging single-cell RNA-seq from different platforms across different conditions
1 Vote | 1 Reply
scRNAseq single-cell merging platforms
16 months ago
mBrio • 10 • updated 16 months ago
Minstein • 100
0
Votes
0
Replies
441
Views
Differential expression using Scran batch corrected data
0 Votes | 0 Replies
RNA-Seq single-cell Scran Batch correction
16 months ago
baldissera152 • 0
0
Votes
1
Reply
781
Views
Smart-seq2 single-cell RNA-Seq
0 Votes | 1 Reply
RNA-Seq Smart-seq2 single-cell
17 months ago
wangdp123 • 150 • updated 17 months ago
kristoffer.vittingseerup ♦ 1.8k
0
Votes
1
Reply
357
Views
newSCESet and SingleCellExperiment basic differences and TMM Normalization
0 Votes | 1 Reply
RNA-Seq single-cell R
18 months ago
hkarakurt • 50
10
Votes
5
Replies
893
Views
How to append the cell barcode and UMI information to the fastq header in paired-end single-cell RNA-seq data?
10 Votes | 5 Replies
rna-seq fastq sequence single-cell
18 months ago
sc243 • 10
3
Votes
5
Replies
556
Views
Adding optional tags to a BAM file
3 Votes | 5 Replies
RNA-Seq bam sam single-cell awk
19 months ago
sc243 • 10
0
Votes
5
Replies
336
Views
How to make this specific "pileup" like plot?
0 Votes | 5 Replies
ggplot2 R single-cell
19 months ago
vivekraiiitkgp • 50
0
Votes
0
Replies
307
Views
Bioinformatician (Single Cell Analysis), Earlham Institute, Norwich, UK
0 Votes | 0 Replies
next-gen single-cell bioinformatics Job
19 months ago
cschu181 ♦ 1.7k
3
Votes
2
Replies
672
Views
What is the reasonable proportion of zero counts in single-cell RNA-Seq data
3 Votes | 2 Replies
rna-seq single-cell rna-seq single-cell sc-RNA
20 months ago
boyu93 • 10 • updated 20 months ago
spacemorrissey • 210
1
Vote
3
Replies
1.8k
Views
Why different tSNE plot with Seurat and Monocle if they'r using the same R package?
1 Vote | 3 Replies
single-cell tsne R Seurat monocle
21 months ago
jgarces • 10 • updated 21 months ago
dppb05 • 70
5
Votes
3
Replies
2.4k
Views
What is the difference between single-cell RNA-Seq and typical RNA-Seq in terms of data analysis procedure
5 Votes | 3 Replies
single-cell RNA-Seq
21 months ago
wangdp123 • 150 • updated 21 months ago
Devon Ryan 90k
6
Votes
6
Replies
1.3k
Views
How to add RG tag into the optional field in a BAM file
6 Votes | 6 Replies
sequencing single-cell bam samtools
22 months ago
gundalav • 270 • updated 22 months ago
finswimmer 11k
7
Votes
8
Replies
1.1k
Views
lack of replicates in single-cell RNA-seq
7 Votes | 8 Replies
RNA-Seq scRNA-seq single-cell
22 months ago
igor 7.7k • updated 22 months ago
Friederike 4.2k
3
Votes
1
Reply
1.5k
Views
Variant calling on single-cell data
3 Votes | 1 Reply
variant single-cell SNP
2.3 years ago
vinvan • 50 • updated 23 months ago
oneillkza • 80
0
Votes
0
Replies
632
Views
Bio informatician - Single cell RNA SEQ Analysis
0 Votes | 0 Replies
RNA-Seq Bio-informatician sequencing Single-Cell Job
23 months ago
sandrina.evrard • 0
0
Votes
2
Replies
633
Views
Differential expression between two biological samples sequenced with single-cell RNA-seq with thousands of cells in each
0 Votes | 2 Replies
single-cell rna-seq R differential expression
24 months ago
Naim.Mahi • 40
2
Votes
1
Reply
1.2k
Views
Regulatory Network Inference from Single-cell RNAseq Data
2 Votes | 1 Reply
RNA-Seq single-cell gene regulatory network
2.1 years ago
whou • 0 • updated 2.1 years ago
genomax 68k
0
Votes
2
Replies
555
Views
Single-cell cluster : up- vs down-regulated marker genes
0 Votes | 2 Replies
single-cell marker genes RNA-Seq cluster seurat
2.1 years ago
PR • 10 • updated 2.1 years ago
igor 7.7k
0
Votes
1
Reply
1.2k
Views
GSVA for single-cell marker genes
0 Votes | 1 Reply
R RNA-Seq gsva single-cell
2.1 years ago
PR • 10 • updated 2.1 years ago
Biostar 20
0
Votes
2
Replies
479
Views
Having trouble using the SAFE clustering method
0 Votes | 2 Replies
single-cell RNA-Seq SAFE clustering cluster
2.2 years ago
Chynoki • 0
0
Votes
0
Replies
665
Views
Research Associate (Bioinformatics) Centre for Trophoblast Research, University of Cambridge, UK
0 Votes | 0 Replies
RNA-Seq core-facility Epigenetics Single-cell Job
2.4 years ago
russellshamilton • 0
0
Votes
0
Replies
1.0k
Views
scRNA-seq: how to visualize SNN-Cliq clustering result
0 Votes | 0 Replies
scRNAseq single-cell SNN Snn-cliq tsne
2.6 years ago
pacman • 50
0
Votes
1
Reply
610
Views
SCDE Package scde.error.models ERROR
0 Votes | 1 Reply
R single-cell RNA-Seq
2.7 years ago
shg018 • 0 • updated 2.7 years ago
dfscruz • 0
58 results • Page 1 of 2
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Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
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Answer: How to install CRISPRCasFinder under Ubuntu without having administrator rights?
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Recent Replies
Answer: About CIRI's output by Magdalena • 0
Hello Johann, Hope you are well. Any progress in the topic? Did you manage to deal with CIRI output file? I have similar problems right no…
Comment: This is a test post by Natay Aberra 0
@Natay-Aberra test the mentions still work
Answer: This is a test post by Natay Aberra 0
Add an answer to this
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